RNA–Protein interactions for RNA: ENST00000372235.7

TMEM53-201, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 890 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-201ENST00000372235 RNF32Q9H0A6 362 aa17.88■□□□□ 0.45
TMEM53-201ENST00000372235 WHRNQ9P202 907 aa17.88■□□□□ 0.45
TMEM53-201ENST00000372235 KCNE2Q9Y6J6 123 aa17.88■□□□□ 0.45
TMEM53-201ENST00000372235 FAM95CA0A1B0GW59 222 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 FEZF1A0PJY2 475 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 CDK2AP1O14519 115 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 OR1F1O43749 312 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 JAK1P23458 1154 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 HPDP32754 393 aaPredicted RBP17.87■□□□□ 0.45
TMEM53-201ENST00000372235 XCR1P46094 333 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 EEF1A2Q05639 463 aaKnown RBP17.87■□□□□ 0.45
TMEM53-201ENST00000372235 EXT1Q16394 746 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 EIF2S3LQ2VIR3 472 aaKnown RBP17.87■□□□□ 0.45
TMEM53-201ENST00000372235 MBOAT1Q6ZNC8 495 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 FRA10AC1Q70Z53 315 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 CYS1Q717R9 158 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 CPEB2Q7Z5Q1 589 aaKnown RBP17.87■□□□□ 0.45
TMEM53-201ENST00000372235 ANKMY2Q8IV38 441 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 ZBED8Q8IZ13 594 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 BRIX1Q8TDN6 353 aaKnown RBP17.87■□□□□ 0.45
TMEM53-201ENST00000372235 TSPAN17Q96FV3 270 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 CYTH2Q99418 400 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 KRT12Q99456 494 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 OLFM1Q99784 485 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 AIF1LQ9BQI0 150 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 CAPS2Q9BXY5 557 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 VN1R1Q9GZP7 353 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 RHOJQ9H4E5 214 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 SYNPO2LQ9H987 977 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 PELI2Q9HAT8 420 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 PLAC1Q9HBJ0 212 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 PTGFRNQ9P2B2 879 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 ZFP69BQ9UJL9 534 aa17.87■□□□□ 0.45
TMEM53-201ENST00000372235 MDC1Q14676 2089 aaKnown RBP17.87■□□□□ 0.45
TMEM53-201ENST00000372235 NDUFS4O43181 175 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 GUCA1CO95843 209 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 GSTA2P09210 222 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 EDN3P14138 238 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 IL1RNP18510 177 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 GSTM2P28161 218 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 SOX11P35716 441 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 MAT1AQ00266 395 aaKnown RBP17.86■□□□□ 0.45
TMEM53-201ENST00000372235 POU4F1Q01851 419 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 MEF2AQ02078 507 aaPredicted RBP17.86■□□□□ 0.45
TMEM53-201ENST00000372235 CAV1Q03135 178 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 MRPL49Q13405 166 aaKnown RBP17.86■□□□□ 0.45
TMEM53-201ENST00000372235 PCOLCEQ15113 449 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 ABHD17BQ5VST6 288 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 FAAH2Q6GMR7 532 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 SBSNQ6UWP8 590 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 TCAIMQ8N3R3 496 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 BCORP1Q8N888 145 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 TTLQ8NG68 377 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 FAR1Q8WVX9 515 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 PYCR2Q96C36 320 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 EGFL8Q99944 293 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 ERP44Q9BS26 406 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 PHACTR1Q9C0D0 580 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 ABI3Q9P2A4 366 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 SLC5A6Q9Y289 635 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 SNX24Q9Y343 169 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 UTP11Q9Y3A2 253 aaKnown RBP17.86■□□□□ 0.45
TMEM53-201ENST00000372235 NAALAD2Q9Y3Q0 740 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 OARD1Q9Y530 152 aa17.86■□□□□ 0.45
TMEM53-201ENST00000372235 FFAR3O14843 346 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 GPR42O15529 346 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 LCMT2O60294 686 aaKnown RBP17.85■□□□□ 0.45
TMEM53-201ENST00000372235 KLHL18O94889 574 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 SAT1P21673 171 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 RPL21P46778 160 aaKnown RBP17.85■□□□□ 0.45
TMEM53-201ENST00000372235 SYT16Q17RD7 645 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 PLAG1Q6DJT9 500 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 KCT2Q8NC54 265 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 PLPP5Q8NEB5 264 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 NT5CQ8TCD5 201 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 SEC16BQ96JE7 1060 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 IMMP1LQ96LU5 166 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 C5orf34Q96MH7 638 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 PWWP2AQ96N64 755 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 WDR83Q9BRX9 315 aaKnown RBP17.85■□□□□ 0.45
TMEM53-201ENST00000372235 GPAMQ9HCL2 828 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 CTNNAL1Q9UBT7 734 aa17.85■□□□□ 0.45
TMEM53-201ENST00000372235 SHANK1Q9Y566 2161 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 SGK494L7N484 410 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 H2AFYO75367 372 aaKnown RBP17.84■□□□□ 0.45
TMEM53-201ENST00000372235 ALOX12P18054 663 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 GNAZP19086 355 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 TNFSF10P50591 281 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 PER3P56645 1201 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 PPP1R3AQ16821 1122 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 CDKL4Q5MAI5 379 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 THOC6Q86W42 341 aaKnown RBP17.84■□□□□ 0.45
TMEM53-201ENST00000372235 AFAP1L2Q8N4X5 818 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 SPATA4Q8NEY3 305 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 OR1N1Q8NGS0 311 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 ZCCHC10Q8TBK6 192 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 M1APQ8TC57 530 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 PSMF1Q92530 271 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 NEIL2Q969S2 332 aa17.84■□□□□ 0.45
TMEM53-201ENST00000372235 ZNF354BQ96LW1 612 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms