RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 LRRC74AQ0VAA2 488 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 SCAPQ12770 1279 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 KLHL12Q53G59 568 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 HES5Q5TA89 166 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 FAM72AQ5TYM5 149 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 EEF1A1P5Q5VTE0 462 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 STEAP4Q687X5 459 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 FAM72DQ6L9T8 149 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 SYVN1Q86TM6 617 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 SERINC5Q86VE9 423 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 FAM72BQ86X60 149 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 CMIPQ8IY22 773 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 CCNYQ8ND76 341 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 HMGCLL1Q8TB92 370 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 FBLIM1Q8WUP2 373 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 NTAN1Q96AB6 310 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 TRMT2BQ96GJ1 504 aaKnown RBP8.57□□□□□ -1.04
ATG4A-203ENST00000372232 LINC00052Q96N35 136 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 TOX2Q96NM4 488 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 GAS2L1Q99501 681 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-203ENST00000372232 PAAF1Q9BRP4 392 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 BBS2Q9BXC9 721 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 SLC22A4Q9H015 551 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 RNF121Q9H920 327 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 ZBTB20Q9HC78 741 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-203ENST00000372232 PAK6Q9NQU5 681 aaPredicted RBP8.57□□□□□ -1.04
ATG4A-203ENST00000372232 FAM118AQ9NWS6 357 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 ABCD2Q9UBJ2 740 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 CDH9Q9ULB4 789 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 BAIAP2Q9UQB8 552 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 NDUFAF1Q9Y375 327 aa8.57□□□□□ -1.04
ATG4A-203ENST00000372232 PIPSLA2A3N6 862 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 EFCAB10A6NFE3 127 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 CASTOR2A6NHX0 329 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 DBX1A6NMT0 343 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 HHLA1C9JL84 531 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 PTGES3LE9PB15 166 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 EIF1BO60739 113 aaKnown RBP8.56□□□□□ -1.04
ATG4A-203ENST00000372232 PMPCBO75439 489 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 PGK1P00558 417 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 HBQ1P09105 142 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 GSTP1P09211 210 aaKnown RBP8.56□□□□□ -1.04
ATG4A-203ENST00000372232 UMPSP11172 480 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 CD36P16671 472 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 KCNA5P22460 613 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 CPN2P22792 545 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 PSMB9P28065 219 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 EIF1P41567 113 aaKnown RBP8.56□□□□□ -1.04
ATG4A-203ENST00000372232 PIK3CBP42338 1070 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 HK3P52790 923 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 DCDC1P59894 354 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 IL2P60568 153 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 SPEM2Q0P670 501 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 ASAH1Q13510 395 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 UPP1Q16831 310 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 COL28A1Q2UY09 1125 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 SPATS1Q496A3 300 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 GLYATQ6IB77 296 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 TRILQ7L0X0 811 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 SNX20Q7Z614 316 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 TP53INP2Q8IXH6 220 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 OR8H2Q8N162 312 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 ZNF567Q8N184 647 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 OR6S1Q8NH40 331 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 SETD7Q8WTS6 366 aaKnown RBP8.56□□□□□ -1.04
ATG4A-203ENST00000372232 ELMO1Q92556 727 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 PGAP3Q96FM1 320 aaPredicted RBP8.56□□□□□ -1.04
ATG4A-203ENST00000372232 TRNT1Q96Q11 434 aaKnown RBP8.56□□□□□ -1.04
ATG4A-203ENST00000372232 CEP41Q9BYV8 373 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 PPIL3Q9H2H8 161 aaKnown RBP8.56□□□□□ -1.04
ATG4A-203ENST00000372232 HEXA-AS1Q9H8Q6 139 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 AGO3Q9H9G7 860 aaKnown RBP8.56□□□□□ -1.04
ATG4A-203ENST00000372232 SAGE1Q9NXZ1 904 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 CTSFQ9UBX1 484 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 FBXW11Q9UKB1 542 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 KCNK7Q9Y2U2 307 aa8.56□□□□□ -1.04
ATG4A-203ENST00000372232 A0A1B0GTQ1 180 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 TCRBV5S2A0A599 114 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 TUBAL3A6NHL2 446 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 G3V2L1 256 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 INPPL1O15357 1258 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 MRPS14O60783 128 aaKnown RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 TRIM13O60858 407 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 TSC22D2O75157 780 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 PAPSS2O95340 614 aaPredicted RBP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 LTFP02788 710 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 CYBAP13498 195 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ERCC2P18074 760 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 RPS3P23396 243 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATG4A-203ENST00000372232 PSMB4P28070 264 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 CSKP41240 450 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 MAP2K4P45985 399 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ISL1P61371 349 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 CRADDP78560 199 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 CRHR2Q13324 411 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 MAB21L1Q13394 359 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 GPR33Q49SQ1 333 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 CYP27C1Q4G0S4 372 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 TIGD5Q53EQ6 642 aa8.55□□□□□ -1.04
ATG4A-203ENST00000372232 ARMCX4Q5H9R4 360 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms