RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 CCT6BQ92526 530 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 ZIM3Q96PE6 472 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 SMC6Q96SB8 1091 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 RUFY1Q96T51 708 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 MACROD1Q9BQ69 325 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 SARGQ9BW04 601 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 PITHD1Q9GZP4 211 aaPredicted RBP14.13□□□□□ -0.15
COL9A1-204ENST00000370496 ACTL8Q9H568 366 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 ACTR8Q9H981 624 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 IL17BQ9UHF5 180 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 ZFP69BQ9UJL9 534 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 GRID1Q9ULK0 1009 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 PADI2Q9Y2J8 665 aa14.13□□□□□ -0.15
COL9A1-204ENST00000370496 MRPS18BQ9Y676 258 aaKnown RBP14.13□□□□□ -0.15
COL9A1-204ENST00000370496 ZNF891A8MT65 544 aaPredicted RBP14.12□□□□□ -0.15
COL9A1-204ENST00000370496 E2F3O00716 465 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 PRPF4O43172 522 aaKnown RBP eCLIP14.12□□□□□ -0.15
COL9A1-204ENST00000370496 EFSO43281 561 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 MED26O95402 600 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 SBK3P0C264 359 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 MYL2P10916 166 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 PIM1P11309 404 aaPredicted RBP14.12□□□□□ -0.15
COL9A1-204ENST00000370496 FBLP22087 321 aaKnown RBP14.12□□□□□ -0.15
COL9A1-204ENST00000370496 ATP5F1P24539 256 aaPredicted RBP14.12□□□□□ -0.15
COL9A1-204ENST00000370496 GSTM2P28161 218 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 VAC14Q08AM6 782 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 PWP1Q13610 501 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 TBCCQ15814 346 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 RBBP7Q16576 425 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 COL28A1Q2UY09 1125 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 CCDC153Q494R4 210 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 MLIPQ5VWP3 458 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 LCN10Q6JVE6 187 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 PRMT9Q6P2P2 845 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 CROCCP2Q86T23 111 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 SLC22A9Q8IVM8 553 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 DTWD1Q8N5C7 304 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 ANKRD53Q8N9V6 530 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 TRPV3Q8NET8 790 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 ATP6V1E2Q96A05 226 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 COL26A1Q96A83 441 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 WDR34Q96EX3 536 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 MVB12AQ96EY5 273 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 SLC45A3Q96JT2 553 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 GPR87Q9BY21 358 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 IPPKQ9H8X2 491 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 ARGLU1Q9NWB6 273 aaPredicted RBP14.12□□□□□ -0.15
COL9A1-204ENST00000370496 SENP1Q9P0U3 644 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 MID2Q9UJV3 735 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 PCTPQ9UKL6 214 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 EMCNQ9ULC0 261 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 CDC14AQ9UNH5 594 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 SSUH2Q9Y2M2 353 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 MAU2Q9Y6X3 613 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 PKD1L2Q7Z442 2459 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 EPG5Q9HCE0 2579 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 CFAP47Q6ZTR5 3102 aa14.12□□□□□ -0.15
COL9A1-204ENST00000370496 TERTO14746 1132 aaKnown RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 PROCP04070 461 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 RPS17P08708 135 aaKnown RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 RAB40ALP0C0E4 278 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 PCNAP12004 261 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 IL1RNP18510 177 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 WT1P19544 449 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 CD22P20273 847 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 ITGAXP20702 1163 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 F8A1P23610 371 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 PTPN4P29074 926 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 OR1D4P47884 311 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 AVPR1BP47901 424 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 CCNG1P51959 295 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 RPS18P62269 152 aaKnown RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 HERVK_113P63132 956 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 MC1RQ01726 317 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 SLC18A2Q05940 514 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 BEND6Q5SZJ8 279 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 GRHL2Q6ISB3 625 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 TMEM214Q6NUQ4 689 aaKnown RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 LRIG3Q6UXM1 1119 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 SH2D5Q6ZV89 423 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 TMEM151AQ8N4L1 468 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 KCT2Q8NC54 265 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 NT5CQ8TCD5 201 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 PPP4R1Q8TF05 950 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 UBE2E3Q969T4 207 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 FKBP10Q96AY3 582 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 ZBTB9Q96C00 473 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 TM4SF19Q96DZ7 209 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 MMABQ96EY8 250 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 CRELD1Q96HD1 420 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 ERVK-6Q9BXR3 956 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 NOL11Q9H8H0 719 aaKnown RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 ANKHQ9HCJ1 492 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 ZNF304Q9HCX3 659 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 SEMA4BQ9NPR2 832 aaPredicted RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 MKS1Q9NXB0 559 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 MRPS2Q9Y399 296 aaKnown RBP14.11□□□□□ -0.15
COL9A1-204ENST00000370496 PCDHGA6Q9Y5G7 932 aa14.11□□□□□ -0.15
COL9A1-204ENST00000370496 ZZEF1O43149 2961 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms