RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 WDR45BQ5MNZ6 344 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 TMTC4Q5T4D3 741 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 ATAD3BQ5T9A4 648 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 FAAH2Q6GMR7 532 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 NEK5Q6P3R8 708 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 SLC22A16Q86VW1 577 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 CDC26Q8NHZ8 85 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 SIPA1Q96FS4 1042 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 UHRF1Q96T88 793 aaPredicted RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 CCM2Q9BSQ5 444 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 TBCDQ9BTW9 1192 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 NUSAP1Q9BXS6 441 aaKnown RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 MROQ9BYG7 248 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 CD244Q9BZW8 370 aa10.29□□□□□ -0.76
TPM3-212ENST00000368533 RSPH9Q9H1X1 276 aaPredicted RBP10.29□□□□□ -0.76
TPM3-212ENST00000368533 ZNF106Q9H2Y7 1883 aaKnown RBP10.28□□□□□ -0.76
TPM3-212ENST00000368533 TCRBV21S2A2A0A5A6 115 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 AGRPO00253 132 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 GNGT2O14610 69 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 STX16O14662 325 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 FTH1P02794 183 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 CAPNS1P04632 268 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 GPIP06744 558 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 FCGR1AP12314 374 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 BMP8BP34820 402 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 COPZ1P61923 177 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 GRSF1Q12849 480 aaKnown RBP eCLIP10.28□□□□□ -0.76
TPM3-212ENST00000368533 SGCGQ13326 291 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 IMPG1Q17R60 797 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 FAM214AQ32MH5 1076 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 ZDHHC20Q5W0Z9 365 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 ZNF776Q68DI1 518 aaPredicted RBP10.28□□□□□ -0.76
TPM3-212ENST00000368533 SYTL1Q8IYJ3 562 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 FAM160A2Q8N612 972 aaPredicted RBP10.28□□□□□ -0.76
TPM3-212ENST00000368533 FBXO30Q8TB52 745 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 ASB11Q8WXH4 323 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 ING2Q9H160 280 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 UBE2ZQ9H832 354 aaPredicted RBP10.28□□□□□ -0.76
TPM3-212ENST00000368533 IFT52Q9Y366 437 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 MUC22E2RYF6 1773 aaPredicted RBP10.28□□□□□ -0.76
TPM3-212ENST00000368533 ASPDHA6ND91 283 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 POM121BA6NF01 834 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 CCRL2O00421 344 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 SNAP29O95721 258 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 ALBP02768 609 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 EPB42P16452 691 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 ELK4P28324 431 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 RPS9P46781 194 aaKnown RBP10.28□□□□□ -0.76
TPM3-212ENST00000368533 DCDC1P59894 354 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 CDK3Q00526 305 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 ILF2Q12905 390 aaKnown RBP10.28□□□□□ -0.76
TPM3-212ENST00000368533 TRAF3Q13114 568 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 CAMK2GQ13555 558 aaPredicted RBP10.28□□□□□ -0.76
TPM3-212ENST00000368533 GTF2H3Q13889 308 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 PNCKQ6P2M8 343 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 STK32CQ86UX6 486 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 FAM20CQ8IXL6 584 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 SFRP1Q8N474 314 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 PROKR1Q8TCW9 393 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 DUS3LQ96G46 650 aaKnown RBP10.28□□□□□ -0.76
TPM3-212ENST00000368533 SH3YL1Q96HL8 342 aaPredicted RBP10.28□□□□□ -0.76
TPM3-212ENST00000368533 ZBTB18Q99592 522 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 DGCR6LQ9BY27 220 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 TPSD1Q9BZJ3 242 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 PLXNA2O75051 1894 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 KIAA1549LQ6ZVL6 1849 aa10.28□□□□□ -0.76
TPM3-212ENST00000368533 FAM234BA2RU67 622 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 TAF4O00268 1085 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 STK25O00506 426 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 MBTPS2O43462 519 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 KLK8O60259 260 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 PRAMEF4O60810 478 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 ACADMP11310 421 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 IL9P15248 144 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 CCT8P50990 548 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 PPP1R8Q12972 351 aaKnown RBP10.27□□□□□ -0.76
TPM3-212ENST00000368533 ZNF542PQ5EBM4 170 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 PRAMEF9Q5VWM5 478 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 CYP20A1Q6UW02 462 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 Q6ZSR9 355 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 TBC1D21Q8IYX1 336 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 PDPRQ8NCN5 879 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 TNIP2Q8NFZ5 429 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 OR7G1Q8NGA0 311 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 OR5AR1Q8NGP9 310 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 MCOLN3Q8TDD5 553 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 SNX19Q92543 992 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 NCLNQ969V3 563 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 PDLIM5Q96HC4 596 aaKnown RBP10.27□□□□□ -0.76
TPM3-212ENST00000368533 MTERF1Q99551 399 aaKnown RBP10.27□□□□□ -0.76
TPM3-212ENST00000368533 BDH2Q9BUT1 245 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 ADNPQ9H2P0 1102 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 SMPD3Q9NY59 655 aaPredicted RBP10.27□□□□□ -0.76
TPM3-212ENST00000368533 ASF1AQ9Y294 204 aa10.27□□□□□ -0.76
TPM3-212ENST00000368533 ABCA7Q8IZY2 2146 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 ZSCAN5BA6NJL1 495 aa10.27□□□□□ -0.77
TPM3-212ENST00000368533 RNGTTO60942 597 aaKnown RBP10.27□□□□□ -0.77
TPM3-212ENST00000368533 EEDO75530 441 aaKnown RBP10.27□□□□□ -0.77
TPM3-212ENST00000368533 RSL1D1O76021 490 aaKnown RBP10.27□□□□□ -0.77
TPM3-212ENST00000368533 STATHP02808 62 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms