RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.31□□□□□ -0.6
COPA-202ENST00000368069 APCDD1Q8J025 514 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 CHCHD4Q8N4Q1 142 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 ARRDC2Q8TBH0 407 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 TMEM27Q9HBJ8 222 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 TDP1Q9NUW8 608 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 P2RX2Q9UBL9 471 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 LOC285095A0A1B0GVY8 99 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 AREL1O15033 823 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 TSPAN6O43657 245 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 AVPR1BP47901 424 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 RAPSNQ13702 412 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 KCNC3Q14003 757 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 SLC9A5Q14940 896 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 PCBP2Q15366 365 aaKnown RBP eCLIP11.31□□□□□ -0.67e-7■■□□□ 14.4
COPA-202ENST00000368069 LY6G5CQ5SRR4 150 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 LIPJQ5W064 366 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 CNKSR3Q6P9H4 555 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 MMAAQ8IVH4 418 aaKnown RBP11.31□□□□□ -0.6
COPA-202ENST00000368069 C1QTNF1Q9BXJ1 281 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 UCK2Q9BZX2 261 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 MRPS30Q9NP92 439 aaKnown RBP11.31□□□□□ -0.6
COPA-202ENST00000368069 AGPAT4Q9NRZ5 378 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 ING4Q9UNL4 249 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 COLEC10Q9Y6Z7 277 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 PRMT3O60678 531 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 AOC2O75106 756 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 STATHP02808 62 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 GNAO1P09471 354 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 MAT2AP31153 395 aaKnown RBP11.31□□□□□ -0.6
COPA-202ENST00000368069 RPS3AP61247 264 aaKnown RBP11.31□□□□□ -0.6
COPA-202ENST00000368069 RCAN2Q14206 197 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 CLEC12AQ5QGZ9 265 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 SMARCD3Q6STE5 483 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 GALNT10Q86SR1 603 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 TSPAN33Q86UF1 283 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 KLHL6Q8WZ60 621 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 TFAP2CQ92754 450 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 KCNN1Q92952 543 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 RGMAQ96B86 450 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 C11orf24Q96F05 449 aaPredicted RBP11.31□□□□□ -0.6
COPA-202ENST00000368069 MS4A4AQ96JQ5 239 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 DMRTB1Q96MA1 342 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 SMIM14Q96QK8 99 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 ATOH8Q96SQ7 321 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 TRMT61BQ9BVS5 477 aaKnown RBP11.31□□□□□ -0.6
COPA-202ENST00000368069 TBCCD1Q9NVR7 557 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 COMMD3Q9UBI1 195 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 PLAGL1Q9UM63 463 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 MMP20O60882 483 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 ALPPP05187 535 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 GRIA2P42262 883 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 ZNF140P52738 457 aaPredicted RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 STXBP1P61764 594 aaKnown RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 ADAM17P78536 824 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 TMEM115Q12893 351 aaPredicted RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 TEAD2Q15562 447 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 KLHL35Q6PF15 583 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 HDDC2Q7Z4H3 204 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 LILRA2Q8N149 483 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 LINC01465Q8N7H1 131 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 TMEM203Q969S6 136 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 ANKRA2Q9H9E1 313 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 GPR45Q9Y5Y3 372 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 DRGXA6NNA5 263 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 SLC1A7O00341 560 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 SLC35G6P0C7Q6 338 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 MPC1LP0DKB6 136 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 CSTF2P33240 577 aaKnown RBP eCLIP11.3□□□□□ -0.63e-7■■□□□ 11.5
COPA-202ENST00000368069 GUCA1AP43080 201 aaPredicted RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 RPP38P78345 283 aaKnown RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 ZNF155Q12901 538 aaPredicted RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 NDUFA5Q16718 116 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 VITQ6UXI7 678 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 TRIM73Q86UV7 250 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 REM2Q8IYK8 340 aaPredicted RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 VMP1Q96GC9 406 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 LMLNQ96KR4 655 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 RSPH9Q9H1X1 276 aaPredicted RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 REEP4Q9H6H4 257 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 FARSBQ9NSD9 589 aaKnown RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 POLR1DQ9Y2S0 133 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 HCN4Q9Y3Q4 1203 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 PRKAB1Q9Y478 270 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 N6AMT1Q9Y5N5 214 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 SH3PXD2BA1X283 911 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 RIIAD1A6NNX1 92 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 SLC31A1O15431 190 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 LEFTY1O75610 366 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 ADH5P11766 374 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 JUPP14923 745 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 CLCNKAP51800 687 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 OR2B6P58173 313 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 NFATC3Q12968 1075 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 SEMA3BQ13214 749 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 BICRALQ6AI39 1079 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 DRAXINQ8NBI3 349 aaPredicted RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 TFGQ92734 400 aaPredicted RBP11.3□□□□□ -0.6
COPA-202ENST00000368069 TP53INP1Q96A56 240 aa11.3□□□□□ -0.6
COPA-202ENST00000368069 AHCYL2Q96HN2 611 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms