RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 BHMG1C9JSJ3 638 aaPredicted RBP16.28■□□□□ 0.2
NID1-202ENST00000366595 H3BUI4 141 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 SYN3O14994 580 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 MUSKO15146 869 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 LRRTM2O43300 516 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 ITM2AO43736 263 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 SSX5O60225 188 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 CREG1O75629 220 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 IFNA17P01571 189 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 HNRNPA0Q13151 305 aaKnown RBP16.28■□□□□ 0.2
NID1-202ENST00000366595 BCL2A1Q16548 175 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 UAP1L1Q3KQV9 507 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 NRSN1Q8IZ57 195 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 PLEKHO2Q8TD55 490 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 UPF1Q92900 1129 aaKnown RBP eCLIP16.28■□□□□ 0.23e-8■■■□□ 15
NID1-202ENST00000366595 DGAT2Q96PD7 388 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 PKP4Q99569 1192 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 PKP2Q99959 881 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 ZNF226Q9NYT6 803 aa16.28■□□□□ 0.2
NID1-202ENST00000366595 SMIM28A0A1B0GU29 152 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 A0A1W2PP18 115 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 TCRBV7S2A1N4TA0A589 114 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 CDKN2CP42773 168 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 SLBPQ14493 270 aaKnown RBP eCLIP16.27■□□□□ 0.2
NID1-202ENST00000366595 UGT8Q16880 541 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 PIGGQ5H8A4 983 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 SLC29A4Q7RTT9 530 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 PLA2G15Q8NCC3 412 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 ELP5Q8TE02 316 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 WFIKKN2Q8TEU8 576 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 TSPEARQ8WU66 669 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 CDCA5Q96FF9 252 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 TMPRSS11EQ9UL52 423 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 PPM1HQ9ULR3 514 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 PCDHGC4Q9Y5F7 938 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 TRAV6A0A075B6T7 132 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 CAPN5O15484 640 aaPredicted RBP16.27■□□□□ 0.2
NID1-202ENST00000366595 AHSA1O95433 338 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 HPRP00739 348 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 NUDT6P53370 316 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 TRAM2Q15035 370 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 GET4Q7L5D6 327 aaPredicted RBP16.27■□□□□ 0.2
NID1-202ENST00000366595 SMPDL3BQ92485 455 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 IL12RB2Q99665 862 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 LAMP5Q9UJQ1 280 aa16.27■□□□□ 0.2
NID1-202ENST00000366595 ZFP37Q9Y6Q3 630 aaPredicted RBP16.27■□□□□ 0.2
NID1-202ENST00000366595 A0A0J9YVX5 310 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 A0A1W2PPW3 197 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 C2CD4BA6NLJ0 364 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 GPR89AB7ZAQ6 455 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 GPR89BP0CG08 455 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 KLF1Q13351 362 aaPredicted RBP16.27■□□□□ 0.19
NID1-202ENST00000366595 MAELQ96JY0 434 aaKnown RBP16.27■□□□□ 0.19
NID1-202ENST00000366595 HYLS1Q96M11 299 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 RNF208Q9H0X6 261 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 OR51I1Q9H343 314 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 ARL5AQ9Y689 179 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 ATG12O94817 140 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 H2AFB2P0C5Z0 115 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 ZNF182P17025 639 aaPredicted RBP16.27■□□□□ 0.19
NID1-202ENST00000366595 GPR68Q15743 365 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 RPL13AP3Q6NVV1 102 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 CYP4V2Q6ZWL3 525 aaPredicted RBP16.27■□□□□ 0.19
NID1-202ENST00000366595 ISOC1Q96CN7 298 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 HSH2DQ96JZ2 352 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 GRHPRQ9UBQ7 328 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 FBXW11Q9UKB1 542 aa16.27■□□□□ 0.19
NID1-202ENST00000366595 BCHEP06276 602 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 GTF2F2P13984 249 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 VEGFAP15692 232 aaPredicted RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 HOXB9P17482 250 aaPredicted RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 EFNA1P20827 205 aaPredicted RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 CAP1Q01518 475 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 ZSWIM9Q86XI8 627 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 TMEM139Q8IV31 216 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 C7orf34Q96L11 122 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 ORAI3Q9BRQ5 295 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 SEC61A2Q9H9S3 476 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 ZDHHC3Q9NYG2 299 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 DNAJC5BQ9UF47 199 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 C12orf71A8MTZ7 269 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 POLR1CO15160 346 aaPredicted RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 CAPN15O75808 1086 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 PENKP01210 267 aaPredicted RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 ZNF16P17020 682 aaPredicted RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 TLE3Q04726 772 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 XKR5Q6UX68 686 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 ZNF572Q7Z3I7 529 aaPredicted RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 DRAXINQ8NBI3 349 aaPredicted RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 SUN3Q8TAQ9 357 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 SLCO2A1Q92959 643 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 MOAP1Q96BY2 351 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 BIRC7Q96CA5 298 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 LIN37Q96GY3 246 aaPredicted RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 URM1Q9BTM9 101 aaKnown RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 ARL6Q9H0F7 186 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 ALKBH4Q9NXW9 302 aa16.26■□□□□ 0.19
NID1-202ENST00000366595 CREBL2O60519 120 aaPredicted RBP16.26■□□□□ 0.19
NID1-202ENST00000366595 PIM1P11309 404 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms