RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 LDOC1O95751 146 aaPredicted RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 MT-CYBP00156 380 aaPredicted RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 TUBB4AP04350 444 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 ZSCAN5DPP0CG00 497 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 JUPP14923 745 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 CKMT2P17540 419 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 ACP1P24666 158 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 NFKBIAP25963 317 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 PSMB4P28070 264 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 COILP38432 576 aaPredicted RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 GRIA3P42263 894 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 CCT5P48643 541 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 ACADVLP49748 655 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 RPL26P61254 145 aaKnown RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 HNRNPKP61978 463 aaKnown RBP eCLIP7.63□□□□□ -1.19
YBX3-204ENST00000366290 E2F1Q01094 437 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 PDE1CQ14123 709 aaPredicted RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 IRF4Q15306 451 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 ANKRD20A2Q5SQ80 823 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 ANKRD20A1Q5TYW2 823 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 ANKRD20A3Q5VUR7 823 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 KDELC1Q6UW63 502 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 CCNI2Q6ZMN8 369 aaPredicted RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 MACC1Q6ZN28 852 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 Q6ZWC4 215 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 PID1Q7Z2X4 250 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 Q8N1X5 172 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 SPATA22Q8NHS9 363 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 RP9Q8TA86 221 aaKnown RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 PIH1D2Q8WWB5 315 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 RSC1A1Q92681 617 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 MAGOHBQ96A72 148 aaKnown RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 CTHRC1Q96CG8 243 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 SCRN2Q96FV2 425 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 CNDP2Q96KP4 475 aaKnown RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 SMIM14Q96QK8 99 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 FCRL5Q96RD9 977 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 TRIB3Q96RU7 358 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 LYSMD1Q96S90 227 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 NAP1L3Q99457 506 aaPredicted RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 VAT1Q99536 393 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 WRAP53Q9BUR4 548 aaKnown RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 MLPHQ9BV36 600 aaPredicted RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 DDX47Q9H0S4 455 aaKnown RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 GBA3Q9H227 469 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 PRDM8Q9NQV8 689 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 HAUS2Q9NVX0 235 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 KLHL8Q9P2G9 620 aaPredicted RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 RNF14Q9UBS8 474 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 RPL26L1Q9UNX3 145 aaKnown RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 ZNF148Q9UQR1 794 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 TTLL3Q9Y4R7 772 aa7.63□□□□□ -1.19
YBX3-204ENST00000366290 URB1O60287 2271 aaKnown RBP7.63□□□□□ -1.19
YBX3-204ENST00000366290 SETXQ7Z333 2677 aaKnown RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 LY6G6EA0A0G2JKS1 128 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 M0R3H8 397 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 AP4M1O00189 453 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 RECQL5O94762 991 aaPredicted RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 HEXIM1O94992 359 aaKnown RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 ELFN1P0C7U0 828 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 CKMT1AP12532 417 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 TEAD1P28347 426 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 STIP1P31948 543 aaKnown RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 RPL22P35268 128 aaKnown RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 CD86P42081 329 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 FNTAP49354 379 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 KIAA1024LP59773 190 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 SUMO2P61956 95 aaKnown RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 AP2B1P63010 937 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 DPTQ07507 201 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 ABHD18Q0P651 414 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 OLIG2Q13516 323 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 CSHL1Q14406 222 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 CNGA3Q16281 694 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 P3H1Q32P28 736 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 ARMC12Q5T9G4 340 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 ATPAF1Q5TC12 328 aaPredicted RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 KCTD11Q693B1 232 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 GRHL2Q6ISB3 625 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 CCDC137Q6PK04 289 aaKnown RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 ZNF627Q7L945 461 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 TMPRSS12Q86WS5 348 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 SLC44A2Q8IWA5 706 aaPredicted RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 EID2Q8N6I1 236 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 SIRT6Q8N6T7 355 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 PNPLA1Q8N8W4 532 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 ZNF548Q8NEK5 533 aaPredicted RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 SPATA4Q8NEY3 305 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 SLCO2A1Q92959 643 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 VPS50Q96JG6 964 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 TDRD1Q9BXT4 1180 aaKnown RBP7.62□□□□□ -1.19
YBX3-204ENST00000366290 HOMER3Q9NSC5 361 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 SERTAD4Q9NUC0 356 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 NCKIPSDQ9NZQ3 722 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 PCYOX1Q9UHG3 505 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 RAI2Q9Y5P3 530 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 U3KQA8 63 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 UNC13CQ8NB66 2214 aa7.62□□□□□ -1.19
YBX3-204ENST00000366290 ZFC3H1O60293 1989 aaKnown RBP7.61□□□□□ -1.19
YBX3-204ENST00000366290 A0A0J9YYE9 177 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms