RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 RMDN1Q96DB5 314 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 ZNF597Q96LX8 424 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 CFAP57Q96MR6 1250 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 PARLQ9H300 379 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 RNF121Q9H920 327 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 GPN1Q9HCN4 374 aaPredicted RBP3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 RAB9BQ9NP90 201 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 SLC7A10Q9NS82 523 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 PKD2L2Q9NZM6 624 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 STYXL1Q9Y6J8 313 aa3.63□□□□□ -1.83
RNU4-28P-201ENST00000364739 RALGAPA1Q6GYQ0 2036 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 IGHV4-30-2A0A087WSY4 118 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 SLC1A7O00341 560 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 MAGEB2O15479 319 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 PRAF2O60831 178 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 TBX10O75333 385 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 NXPH4O95158 308 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 DNTTP04053 509 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 ACAT1P24752 427 aaKnown RBP3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 KRT20P35900 424 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 CACNG1Q06432 222 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 SRSF9Q13242 221 aaKnown RBP eCLIP3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 RPUSD3Q6P087 351 aaKnown RBP3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 PPP1R21Q6ZMI0 780 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 FBXL16Q8N461 479 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 RBM41Q96IZ5 413 aaKnown RBP3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 NAA11Q9BSU3 229 aaPredicted RBP3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 TXLNGYQ9BZA5 131 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 FN3KQ9H479 309 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 HEXA-AS1Q9H8Q6 139 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 RARRES3Q9UL19 164 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 PLCL2Q9UPR0 1127 aa3.62□□□□□ -1.83
RNU4-28P-201ENST00000364739 FER1L5A0AVI2 2057 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 A0A087WZ39 114 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 A0A1W2PPW3 197 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 PENKP01210 267 aaPredicted RBP3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 CD59P13987 128 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 FOLR2P14207 255 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 ERCC2P18074 760 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 ITIH1P19827 911 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 RIGQ13278 110 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 RBBP7Q16576 425 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 KRBOX4Q5JUW0 171 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 SPECC1Q5M775 1068 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 SLC25A30Q5SVS4 291 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 ATP1A1-AS1Q5TC04 95 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 KRT80Q6KB66 452 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 TTC27Q6P3X3 843 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 OR4N5Q8IXE1 308 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 OR4D10Q8NGI6 311 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 NPRL2Q8WTW4 380 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 NSMAFQ92636 917 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 CHCHD5Q9BSY4 110 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 KRTAP4-3Q9BYR4 195 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 TMX4Q9H1E5 349 aaPredicted RBP3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 TUBB1Q9H4B7 451 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 FAM120CQ9NX05 1096 aaKnown RBP3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 GPR83Q9NYM4 423 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 NLGN3Q9NZ94 848 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 PILRBQ9UKJ0 227 aa3.61□□□□□ -1.83
RNU4-28P-201ENST00000364739 MYL6BP14649 208 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 IL4RP24394 825 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 FCHO2Q0JRZ9 810 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 PEX6Q13608 980 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 COG2Q14746 738 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 ZNF146Q15072 292 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 TAZQ16635 292 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 MS4A18Q3C1V0 323 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 FGD3Q5JSP0 725 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 FAM166AQ6J272 317 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 SLC30A6Q6NXT4 461 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 MOXD1Q6UVY6 613 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 ENPP7Q6UWV6 458 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 C3P1Q6ZMU1 363 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 ZNF841Q6ZN19 808 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 CDHR3Q6ZTQ4 885 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 NRARPQ7Z6K4 114 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 SLC25A42Q86VD7 318 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 CROCCP3Q8IVE0 287 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 LSMEM1Q8N8F7 131 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 OR10G7Q8NGN6 311 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 RPLP0P6Q8NHW5 317 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 SSC4DQ8WTU2 575 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 GDAP1L1Q96MZ0 367 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 RPP25Q9BUL9 199 aaKnown RBP3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 NKIRAS2Q9NYR9 191 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 IL36AQ9UHA7 158 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 LIPGQ9Y5X9 500 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 IL16Q14005 1332 aa3.6□□□□□ -1.83
RNU4-28P-201ENST00000364739 IGLV4-3A0A075B6K6 122 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 IGHV3-20A0A0C4DH32 117 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 IGHV3-38A0A0C4DH36 116 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 A8MVM7 634 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 RPLP0P05388 317 aaKnown RBP3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 HOXD4P09016 255 aaPredicted RBP3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 BCL3P20749 454 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 PTGER3P43115 390 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 RGS7P49802 495 aa3.59□□□□□ -1.83
RNU4-28P-201ENST00000364739 ATP4BP51164 291 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms