RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 PNLIPRP2P54317 469 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 PRKCEQ02156 737 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 C16orf72Q14CZ0 275 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 DUSP5Q16690 384 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 SLC22A6Q4U2R8 563 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 MUC21Q5SSG8 566 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 KRT79Q5XKE5 535 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 IL17RELQ6ZVW7 336 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 ANKRD42Q8N9B4 389 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 FAM71F1Q96KD3 344 aaPredicted RBP1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 RUNDC3BQ96NL0 473 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 BTBD9Q96Q07 612 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 IL12RB2Q99665 862 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 CCDC3Q9BQI4 270 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 PLA2G12AQ9BZM1 189 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 ZBP1Q9H171 429 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 PLSCR3Q9NRY6 295 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 DEPPQ9NTK1 212 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 RRN3Q9NYV6 651 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 FBXO2Q9UK22 296 aaPredicted RBP1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 PLAGL1Q9UM63 463 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 ZFP37Q9Y6Q3 630 aaPredicted RBP1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 SALL1Q9NSC2 1324 aa1.14□□□□□ -2.23
RNU6-238P-201ENST00000363313 TDRD9Q8NDG6 1382 aaKnown RBP1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 TNRQ92752 1358 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 MTMR11A4FU01 709 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 MEIS2O14770 477 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 ZNF749O43361 778 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 TSC22D2O75157 780 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 SAP30O75446 220 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 LDHAP00338 332 aaKnown RBP1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 LAMP2P13473 410 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 RPL9P32969 192 aaKnown RBP1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 FNTAP49354 379 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 LRRC63Q05C16 580 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 AGBL2Q5U5Z8 902 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 PRR27Q6MZM9 219 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 MFSD12Q6NUT3 480 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 ARMCX5Q6P1M9 558 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 CHST9Q7L1S5 443 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 TPRX1Q8N7U7 411 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 GBP7Q8N8V2 638 aaPredicted RBP1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 ZNF564Q8TBZ8 553 aaPredicted RBP1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 KCNE4Q8WWG9 221 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 SYN2Q92777 582 aaPredicted RBP1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 FAF2Q96CS3 445 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 SCLT1Q96NL6 688 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 TBX15Q96SF7 602 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 SEPHS2Q99611 448 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 PAPOLGQ9BWT3 736 aaKnown RBP1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 EQTNQ9NQ60 294 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 ITGA11Q9UKX5 1188 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 ABCG2Q9UNQ0 655 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 MOKQ9UQ07 419 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 WDR83OSQ9Y284 106 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 TMEM98Q9Y2Y6 226 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 SPATA31D1Q6ZQQ2 1576 aa1.13□□□□□ -2.23
RNU6-238P-201ENST00000363313 FCGBPQ9Y6R7 5405 aaPredicted RBP1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 IGKV2-28A0A075B6P5 120 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 TRAV9-2A0A087WT02 112 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 A0A1W2PPQ1 181 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 LOC105371045A0A1W2PR82 267 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 A6NLC8 198 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 ACTL6AO96019 429 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 IGKV2D-28P01615 120 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 PRKAR2BP31323 418 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 GCKRQ14397 625 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 KNOP1Q1ED39 458 aaKnown RBP1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 ZRANB3Q5FWF4 1079 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 LIPJQ5W064 366 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 NUP54Q7Z3B4 507 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 PXKQ7Z7A4 578 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 CCDC60Q8IWA6 550 aaPredicted RBP1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 FBXO39Q8N4B4 442 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 SCFD2Q8WU76 684 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 SRSF12Q8WXF0 261 aaKnown RBP1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 SGF29Q96ES7 293 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 ZBED6CLQ96FA7 236 aaPredicted RBP1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 SIPA1Q96FS4 1042 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 IMMP1LQ96LU5 166 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 ARPC5LQ9BPX5 153 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 SRSF8Q9BRL6 282 aaKnown RBP1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 SDCBP2Q9H190 292 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 OSGEPL1Q9H4B0 414 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 TBC1D17Q9HA65 648 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 WDR41Q9HAD4 459 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 NTN4Q9HB63 628 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 WFDC1Q9HC57 220 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 UBN1Q9NPG3 1134 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 PADI2Q9Y2J8 665 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 PTCH1Q13635 1447 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 NEDD4P46934 1319 aa1.12□□□□□ -2.23
RNU6-238P-201ENST00000363313 IGLV3-16A0A075B6K0 115 aa1.11□□□□□ -2.23
RNU6-238P-201ENST00000363313 CASTOR2A6NHX0 329 aa1.11□□□□□ -2.23
RNU6-238P-201ENST00000363313 FOXI3A8MTJ6 420 aaPredicted RBP1.11□□□□□ -2.23
RNU6-238P-201ENST00000363313 PDXKO00764 312 aa1.11□□□□□ -2.23
RNU6-238P-201ENST00000363313 PAPSS1O43252 624 aaPredicted RBP1.11□□□□□ -2.23
RNU6-238P-201ENST00000363313 CA11O75493 328 aa1.11□□□□□ -2.23
RNU6-238P-201ENST00000363313 RHBDL1O75783 438 aa1.11□□□□□ -2.23
RNU6-238P-201ENST00000363313 OR6B1O95007 311 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms