RNA–Protein interactions for RNA: ENST00000363299.1

RNU5D-1-201, Transcript of RNA, U5D small nuclear 1, humanhuman

BASIC

Gene RNU5D-1, Length 116 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5D-1-201ENST00000363299 PRUNE1Q86TP1 453 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 HSCBQ8IWL3 235 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 KLHDC8BQ8IXV7 354 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 GPC2Q8N158 579 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 C10orf53Q8N6V4 93 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 GBP7Q8N8V2 638 aaPredicted RBP3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 AMER3Q8N944 861 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 KIAA0895Q8NCT3 520 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 MSANTD4Q8NCY6 345 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 DDHD1Q8NEL9 900 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 OR8H1Q8NGG4 311 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 MGARPQ8TDB4 240 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 SMAP2Q8WU79 429 aaPredicted RBP3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 CKAP2Q8WWK9 683 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 SGF29Q96ES7 293 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 RBM41Q96IZ5 413 aaKnown RBP3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 TSPAN18Q96SJ8 248 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 RBM4Q9BWF3 364 aaKnown RBP3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 CACNG6Q9BXT2 260 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 ZNF350Q9GZX5 532 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 WDR13Q9H1Z4 485 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 ZNF696Q9H7X3 374 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 RPF1Q9H9Y2 349 aaKnown RBP3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 GPR173Q9NS66 373 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 MAN2C1Q9NTJ4 1040 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 CNIH4Q9P003 139 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 MTRRQ9UBK8 725 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 PILRBQ9UKJ0 227 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 PRDM4Q9UKN5 801 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 ELF5Q9UKW6 265 aaPredicted RBP3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 NSG2Q9Y328 171 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 HBS1LQ9Y450 684 aaKnown RBP3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 SELENOKQ9Y6D0 94 aa3.68□□□□□ -1.82
RNU5D-1-201ENST00000363299 C13orf42A0A1B0GVH6 325 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 LRRD1A4D1F6 860 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 MSGN1A6NI15 193 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 ZNF195O14628 629 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 PGRMC2O15173 223 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 HTATSF1O43719 755 aaKnown RBP3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 SCO2O43819 266 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 CRCPO75575 148 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 RPL35AP18077 110 aaKnown RBP3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 CYP2A7P20853 494 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 RBMS1P29558 406 aaKnown RBP3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 OR3A1P47881 315 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 PAX9P55771 341 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 DCDC1P59894 354 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 AKAP17AQ02040 695 aaKnown RBP3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 SRSF9Q13242 221 aaKnown RBP eCLIP3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 EFTUD2Q15029 972 aaKnown RBP eCLIP3.67□□□□□ -1.82not detected■■■■■ 36.3
RNU5D-1-201ENST00000363299 PPA1Q15181 289 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 SGSM1Q2NKQ1 1148 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 KRTAP24-1Q3LI83 254 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 ZNF770Q6IQ21 691 aaPredicted RBP3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 PWWP2BQ6NUJ5 590 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 PODNL1Q6PEZ8 512 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 IYDQ6PHW0 289 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 NHLRC1Q6VVB1 395 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 CPEB2Q7Z5Q1 589 aaKnown RBP3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 ZNF329Q86UD4 541 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 ANKRD46Q86W74 232 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 UNC45BQ8IWX7 931 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 MRGPRDQ8TDS7 321 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 ARHGAP45Q92619 1136 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 PTP4A1Q93096 173 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 TBC1D31Q96DN5 1066 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 NAF1Q96HR8 494 aaKnown RBP3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 ASCL2Q99929 193 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 PIGQQ9BRB3 760 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 ALKBH7Q9BT30 221 aaPredicted RBP3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 TDRD1Q9BXT4 1180 aaKnown RBP3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 C10orf88Q9H8K7 445 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 RNPEPL1Q9HAU8 725 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 RNF186Q9NXI6 227 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 TMCC3Q9ULS5 477 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 GAB2Q9UQC2 676 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 ITM2BQ9Y287 266 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 ACEP12821 1306 aa3.67□□□□□ -1.82
RNU5D-1-201ENST00000363299 TRBV4-1A0A0J9YWV2 114 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 MEIOCA2RUB1 952 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 FAM149AA5PLN7 773 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 H3BMM5 538 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 SLC1A7O00341 560 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 TTI1O43156 1089 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 GLCEO94923 617 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 IGLV1-44P01699 117 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 CFC1BP0CG36 223 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 CFC1P0CG37 223 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 CEBPBP17676 345 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 AADACP22760 399 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 ELAVL4P26378 380 aaKnown RBP3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 DUTP33316 252 aaKnown RBP3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 LEPRP48357 1165 aaKnown RBP3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 NR0B1P51843 470 aaKnown RBP3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 RPP38P78345 283 aaKnown RBP3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 SP3Q02447 781 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 ARHGAP1Q07960 439 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 CETN1Q12798 172 aa3.66□□□□□ -1.82
RNU5D-1-201ENST00000363299 TMEM30BQ3MIR4 351 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms