RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 SGCBQ16585 318 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 PDSS1Q5T2R2 415 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 GLT8D1Q68CQ7 371 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 SERPINA9Q86WD7 417 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 TMEM203Q969S6 136 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 IL4I1Q96RQ9 567 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 NMUR1Q9HB89 426 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 ASB3Q9Y575 518 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 HTR3EA5X5Y0 456 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 ZNF705EA8MWA4 302 aaPredicted RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 POLR1CO15160 346 aaPredicted RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 CRYZL1O95825 349 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 PAK4O96013 591 aaPredicted RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 HOXD8P13378 290 aaPredicted RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 ELNP15502 786 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 LUMP51884 338 aaPredicted RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 HNRNPDQ14103 355 aaKnown RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 ATP6AP1Q15904 470 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 PPP2R2DQ66LE6 453 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 SCML4Q8N228 414 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 GOLM1Q8NBJ4 401 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 TMEM145Q8NBT3 493 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 OR10T2Q8NGX3 314 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 GAL3ST1Q99999 423 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 ACBD6Q9BR61 282 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 ASPNQ9BXN1 380 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 SYT4Q9H2B2 425 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 ZBTB26Q9HCK0 441 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 FAM120CQ9NX05 1096 aaKnown RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 FZD1Q9UP38 647 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 HSPE1-MOB4S4R3N1 261 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 UNC13BO14795 1591 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 B4GALT5O43286 388 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 RBBP9O75884 186 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 PRKACBP22694 351 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 LSAMPQ13449 338 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 ABRAXAS2Q15018 415 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 UAP1L1Q3KQV9 507 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 JAGN1Q8N5M9 183 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 KLHL15Q96M94 604 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 ZNF317Q96PQ6 595 aaPredicted RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 ZNF334Q9HCZ1 680 aaPredicted RBP12.49□□□□□ -0.41
SMC4-202ENST00000357388 HCN4Q9Y3Q4 1203 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 PCDHA2Q9Y5H9 948 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 ST14Q9Y5Y6 855 aa12.49□□□□□ -0.41
SMC4-202ENST00000357388 TRAV6A0A075B6T7 132 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 FAM170BA6NMN3 283 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 C9JVG2 144 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 INSIG1O15503 277 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 LRRTM2O43300 516 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 EOMESO95936 686 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 CHRNA1P02708 482 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 RFTN1Q14699 578 aaPredicted RBP12.48□□□□□ -0.41
SMC4-202ENST00000357388 DENND1AQ8TEH3 1009 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 BIRC7Q96CA5 298 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 LRRC46Q96FV0 321 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 KATNBL1Q9H079 304 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 AMBNQ9NP70 447 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 C19orf12Q9NSK7 152 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 FBXW2Q9UKT8 454 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 TVP23AA6NH52 213 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 MEIS2O14770 477 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 TPST2O60704 377 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 BORAQ6PGQ7 559 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 TMCO2Q7Z6W1 182 aaPredicted RBP12.48□□□□□ -0.41
SMC4-202ENST00000357388 ZNF675Q8TD23 568 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 GNPDA2Q8TDQ7 276 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 ZDHHC18Q9NUE0 388 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 GSKIPQ9P0R6 139 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 CNOT11Q9UKZ1 510 aaKnown RBP12.48□□□□□ -0.41
SMC4-202ENST00000357388 CHD1O14646 1710 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 A0A1W2PP18 115 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 J3QLW9 94 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 CREBL2O60519 120 aaPredicted RBP12.48□□□□□ -0.41
SMC4-202ENST00000357388 ZNF19P17023 458 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 CSNK2A2P19784 350 aaPredicted RBP12.48□□□□□ -0.41
SMC4-202ENST00000357388 TAS2R39P59534 338 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 MEP1AQ16819 746 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 C3orf33Q6P1S2 294 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 UGT2A3Q6UWM9 527 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 DPY19L3Q6ZPD9 716 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 NXPE1Q8N323 547 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 C12orf29Q8N999 325 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 SIDT2Q8NBJ9 832 aaKnown RBP12.48□□□□□ -0.41
SMC4-202ENST00000357388 CD99L2Q8TCZ2 262 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 CAPNS2Q96L46 248 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 ARL6Q9H0F7 186 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 TIGARQ9NQ88 270 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 PAK1IP1Q9NWT1 392 aaPredicted RBP12.48□□□□□ -0.41
SMC4-202ENST00000357388 TCRBV7S2A1N4TA0A589 114 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 E7EQ34 232 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 CFIP05156 583 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 SLC6A6P31641 620 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 NCBP2P52298 156 aaKnown RBP eCLIP12.48□□□□□ -0.412e-17■■■■■ 76.5
SMC4-202ENST00000357388 NFKB2Q00653 900 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 PON2Q15165 354 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.48□□□□□ -0.412e-41■■■■■ 207.1
SMC4-202ENST00000357388 TOR1AIP1Q5JTV8 583 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 LRRC66Q68CR7 880 aa12.48□□□□□ -0.41
SMC4-202ENST00000357388 PLEKHG7Q6ZR37 379 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms