RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 KBTBD4Q9NVX7 518 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 KANSL3Q9P2N6 904 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ZC3H13Q5T200 1668 aaKnown RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D3DA0A087WVF3 549 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D3IA0A087WXS9 549 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D3EA0A087X179 549 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D3KA0A087X1G2 549 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D3FA6NER0 549 aaPredicted RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D3LB9A6J9 549 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 INMT-MINDY4F8WBC2 141 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 IL3P08700 152 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 DLDP09622 509 aaKnown RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D3HP0C7X1 549 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 RAB28P51157 221 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 FBXO48Q5FWF7 155 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D3GQ6DHY5 549 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D3CQ6IPX1 549 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 MED27Q6P2C8 311 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D3Q8IZP1 549 aaPredicted RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 C16orf78Q8WTQ4 265 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 LIPHQ8WWY8 451 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TUBA1CQ9BQE3 449 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBL1XR1Q9BZK7 514 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 QPCTLQ9NXS2 382 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 A0A1W2PPL8 197 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 E5RJQ4 531 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 MTX2O75431 263 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 PRKCGP05129 697 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 SNRNP70P08621 437 aaKnown RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 OC90Q02509 493 aaPredicted RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 KLF1Q13351 362 aaPredicted RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 PPA1Q15181 289 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 SLC30A8Q8IWU4 369 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 OR13C3Q8NGS6 347 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 DEDD2Q8WXF8 326 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 SEMA3CQ99985 751 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 A6NHS1 94 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TLR4O00206 839 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 RETP07949 1114 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ACTA2P62736 377 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ACTG2P63267 376 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ACTC1P68032 377 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ACTA1P68133 377 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 GRIK4Q16099 956 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ZBED5Q49AG3 693 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 HECTD2Q5U5R9 776 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ZDHHC20Q5W0Z9 365 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ARHGAP11AQ6P4F7 1023 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 DCBLD1Q8N8Z6 715 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TBC1D16Q8TBP0 767 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TAAR8Q969N4 342 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 SGCZQ96LD1 299 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 PRDM9Q9NQV7 894 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 VSX1Q9NZR4 365 aaPredicted RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 SLC17A7Q9P2U7 560 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ARL6IP5O75915 188 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 IRF2P14316 349 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 CD44P16070 742 aaKnown RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 MAOAP21397 527 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 PRPH2P23942 346 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 MTPNP58546 118 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 C4orf17Q53FE4 359 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 WDR45BQ5MNZ6 344 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 SERPINA12Q8IW75 414 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 MTMR8Q96EF0 704 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 LRRC46Q96FV0 321 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 DNTTIP1Q9H147 329 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 PCDHAC1Q9H158 963 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 GTF2IRD1Q9UHL9 959 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 MAGED1Q9Y5V3 778 aaPredicted RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 PAPSS1O43252 624 aaPredicted RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 RHCEP18577 417 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 PRAMEF13Q5VWM6 474 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 OR52W1Q6IF63 320 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 PDE12Q6L8Q7 609 aaKnown RBP7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TRMOQ9BU70 441 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ZNRF3Q9ULT6 936 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 NT5C1B-RDH14C9J2C7 533 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 SLC7A4O43246 635 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 TLL1O43897 1013 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 BEST1O76090 585 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 GNAZP19086 355 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 EPHA1P21709 976 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 AKR1C2P52895 323 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 ZNF181Q2M3W8 571 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 Q8N402 240 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 STUB1Q9UNE7 303 aa7.82□□□□□ -1.16
SCN8A-201ENST00000354534 MYH13Q9UKX3 1938 aa7.81□□□□□ -1.16
SCN8A-201ENST00000354534 A0A1W2PPK0 400 aa7.81□□□□□ -1.16
SCN8A-201ENST00000354534 BLOC1S5-TXNDC5H3BN57 136 aa7.81□□□□□ -1.16
SCN8A-201ENST00000354534 TERTO14746 1132 aaKnown RBP7.81□□□□□ -1.16
SCN8A-201ENST00000354534 CBLP22681 906 aa7.81□□□□□ -1.16
SCN8A-201ENST00000354534 DGKGP49619 791 aa7.81□□□□□ -1.16
SCN8A-201ENST00000354534 SNU13P55769 128 aaKnown RBP7.81□□□□□ -1.16
SCN8A-201ENST00000354534 LAMTOR4Q0VGL1 99 aa7.81□□□□□ -1.16
SCN8A-201ENST00000354534 PCBP2Q15366 365 aaKnown RBP eCLIP7.81□□□□□ -1.16
SCN8A-201ENST00000354534 IDO2Q6ZQW0 420 aa7.81□□□□□ -1.16
SCN8A-201ENST00000354534 TRABD2AQ86V40 505 aa7.81□□□□□ -1.16
SCN8A-201ENST00000354534 OR10G2Q8NGC3 310 aa7.81□□□□□ -1.16
SCN8A-201ENST00000354534 PNPLA2Q96AD5 504 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms