RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 RAE1P78406 368 aaKnown RBP23.65■■□□□ 1.38
CPNE1-202ENST00000352393 TIGD6Q17RP2 521 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 XKR6Q5GH73 641 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 SLC46A3Q7Z3Q1 461 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 NPAS3Q8IXF0 933 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 MYDGFQ969H8 173 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 MAL2Q969L2 176 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 METTL2AQ96IZ6 378 aaKnown RBP23.65■■□□□ 1.38
CPNE1-202ENST00000352393 ZIC5Q96T25 663 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 TSEN34Q9BSV6 310 aaKnown RBP23.65■■□□□ 1.38
CPNE1-202ENST00000352393 NXF2Q9GZY0 626 aaKnown RBP23.65■■□□□ 1.38
CPNE1-202ENST00000352393 SUV39H2Q9H5I1 410 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 RUBCNLQ9H714 662 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 TMEM184CQ9NVA4 438 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 AGAP5A6NIR3 686 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 E7EQ34 232 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 AQP1P29972 269 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 CTSOP43234 321 aaPredicted RBP23.65■■□□□ 1.38
CPNE1-202ENST00000352393 SPINT3P49223 89 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 DDX39BQ13838 428 aaKnown RBP23.65■■□□□ 1.38
CPNE1-202ENST00000352393 KCNC3Q14003 757 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 DOC2AQ14183 400 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 COLEC12Q5KU26 742 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 ZDHHC20Q5W0Z9 365 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 USP43Q70EL4 1123 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 CCDC103Q8IW40 242 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 IGSF21Q96ID5 467 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 NDUFAF4Q9P032 175 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 ZNF229Q9UJW7 825 aa23.65■■□□□ 1.38
CPNE1-202ENST00000352393 SAGE2PA6NJ88 616 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 GABRR3A8MPY1 467 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 HSD3B1P14060 373 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 HSD3B2P26439 372 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 ZNF181Q2M3W8 571 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 HKDC1Q2TB90 917 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 CPTPQ5TA50 214 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 THOC6Q86W42 341 aaKnown RBP23.64■■□□□ 1.37
CPNE1-202ENST00000352393 FIBINQ8TAL6 211 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 GGHQ92820 318 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 FEVQ99581 238 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 IL21Q9HBE4 155 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 ABCB10Q9NRK6 738 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 TESMINQ9Y4I5 508 aa23.64■■□□□ 1.37
CPNE1-202ENST00000352393 CLCA1A8K7I4 914 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 H0YIV9 168 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 TNFRSF11BO00300 401 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 MYO1DO94832 1006 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 ETHE1O95571 254 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 SERPINB1P30740 379 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 ASMTP46597 345 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 TM4SF4P48230 202 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 GRHL2Q6ISB3 625 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 C22orf39Q6P5X5 142 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 C11orf65Q8NCR3 313 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 OR4C15Q8NGM1 316 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 KLHL25Q9H0H3 589 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 UGT2A1Q9Y4X1 527 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 PCDHGA2Q9Y5H1 932 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 COL4A6Q14031 1691 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 SCN5AQ14524 2016 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 KPNA5O15131 536 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 ADAMDEC1O15204 470 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 GSTM1P09488 218 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 GRK5P34947 590 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 TEKQ02763 1124 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 SLC13A2Q13183 592 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 PPIGQ13427 754 aaKnown RBP eCLIP23.63■■□□□ 1.375e-12■■□□□ 13.5
CPNE1-202ENST00000352393 TEAD4Q15561 434 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 DDX59Q5T1V6 619 aaKnown RBP eCLIP23.63■■□□□ 1.372e-6■■□□□ 13.7
CPNE1-202ENST00000352393 MPP7Q5T2T1 576 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 CPXM2Q8N436 756 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 SLC5A8Q8N695 610 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 C1orf52Q8N6N3 182 aaKnown RBP23.63■■□□□ 1.37
CPNE1-202ENST00000352393 OR10G2Q8NGC3 310 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 RAD9AQ99638 391 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 BRD9Q9H8M2 597 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 BRF2Q9HAW0 419 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 SPASTQ9UBP0 616 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 B4GALT6Q9UBX8 382 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 CD84Q9UIB8 345 aa23.63■■□□□ 1.37
CPNE1-202ENST00000352393 LSM7Q9UK45 103 aaKnown RBP23.63■■□□□ 1.37
CPNE1-202ENST00000352393 DSCR3O14972 297 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 SGTAO43765 313 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 IDSP22304 550 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 SELENOWP63302 87 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 SELENBP1Q13228 472 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.62■■□□□ 1.37
CPNE1-202ENST00000352393 ANXA8L1Q5VT79 327 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 BBS7Q8IWZ6 715 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 ELMO1Q92556 727 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 CCDC59Q9P031 241 aaKnown RBP23.62■■□□□ 1.37
CPNE1-202ENST00000352393 ALPK3Q96L96 1907 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 ARHGEF33A8MVX0 844 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 PRRG1O14668 218 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 PCDH7O60245 1069 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 MTX2O75431 263 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 GABRB1P18505 474 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 HOXD12P35452 270 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 MPPE1Q53F39 396 aa23.62■■□□□ 1.37
CPNE1-202ENST00000352393 NAGSQ8N159 534 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms