RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 MAFBQ9Y5Q3 323 aaPredicted RBP12.81□□□□□ -0.36
IFT88-202ENST00000351808 TRAV20A0A0B4J274 112 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 MROH6A6NGR9 719 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 LINC00587B1AMM8 73 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 E9PQ18 207 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 ZNF670-ZNF695F2Z2N8 137 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 PITPNM1O00562 1244 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 GJB1P08034 283 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 STAG3L1P0CL83 205 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 ADRA1BP35368 520 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 CRYBB2P43320 205 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 FLI1Q01543 452 aaPredicted RBP12.81□□□□□ -0.36
IFT88-202ENST00000351808 PUDPQ08623 228 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 AMHR2Q16671 573 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 AP5B1Q2VPB7 878 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 IL27RAQ6UWB1 636 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 ZNF704Q6ZNC4 412 aaPredicted RBP12.81□□□□□ -0.36
IFT88-202ENST00000351808 FAM92BQ6ZTR7 304 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 TMPRSS9Q7Z410 1059 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 MILR1Q7Z6M3 343 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 ZBTB8OSQ8IWT0 167 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 MYO19Q96H55 970 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 SLC28A3Q9HAS3 691 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 B3GAT2Q9NPZ5 323 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 SLC39A1Q9NY26 324 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 PLEKHB1Q9UF11 243 aaPredicted RBP12.81□□□□□ -0.36
IFT88-202ENST00000351808 LIPT1Q9Y234 373 aa12.81□□□□□ -0.36
IFT88-202ENST00000351808 ISM1B1AKI9 464 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 SLC7A4O43246 635 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 TREHO43280 583 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 CHRM5P08912 532 aaPredicted RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 PSMA1P25786 263 aaKnown RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 HOXA1P49639 335 aaPredicted RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 TIAL1Q01085 375 aaKnown RBP eCLIP12.8□□□□□ -0.36
IFT88-202ENST00000351808 LRRC32Q14392 662 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 DDI2Q5TDH0 399 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 ZZZ3Q8IYH5 903 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 POF1BQ8WVV4 589 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 SLC5A11Q8WWX8 675 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 ULK4Q96C45 1275 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 MCOLN1Q9GZU1 580 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 TTYH1Q9H313 450 aaPredicted RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 ABHD16BQ9H3Z7 469 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 DBNDD1Q9H9R9 158 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 ADAM30Q9UKF2 790 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 MRPL42Q9Y6G3 142 aaKnown RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 FAM220BPB1ANY3 271 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 SLC30A4O14863 429 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 CA12O43570 354 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 HCN1O60741 890 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 GLAP06280 429 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 RPS17P08708 135 aaKnown RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 RPL17P18621 184 aaKnown RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 NNMTP40261 264 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 ARSDP51689 593 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 BLVRAP53004 296 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.8□□□□□ -0.36
IFT88-202ENST00000351808 CSTF3Q12996 717 aaKnown RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 DGKZQ13574 1117 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 LTB4RQ15722 352 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 ATRAIDQ6UW56 229 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 RASSF6Q6ZTQ3 369 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 LIX1Q8N485 282 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 OR52B6Q8NGF0 335 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 OR8D4Q8NGM9 314 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 OR6B3Q8NGW1 331 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 C9orf43Q8TAL5 461 aaPredicted RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 SLC25A46Q96AG3 418 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 MSLNLQ96KJ4 702 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 P2RY13Q9BPV8 354 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 GABARAPL3Q9BY60 117 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 SAMD4AQ9UPU9 718 aaKnown RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 ASB1Q9Y576 335 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 MAB21L2Q9Y586 359 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 PCDHGB3Q9Y5G1 929 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 CDH10Q9Y6N8 788 aa12.8□□□□□ -0.36
IFT88-202ENST00000351808 COL14A1Q05707 1796 aaKnown RBP12.8□□□□□ -0.36
IFT88-202ENST00000351808 A0A0B4J203 849 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 IFRD1O00458 451 aaPredicted RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 YKT6O15498 198 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 HRO43593 1189 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 LZTS3O60299 673 aaPredicted RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 ECI2O75521 394 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 ANXA9O76027 345 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 LDOC1O95751 146 aaPredicted RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 ICAM3P32942 547 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 CSKP41240 450 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 GZMMP51124 257 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 CYP4F8P98187 520 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 HSF2Q03933 536 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 COX10Q12887 443 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 TSNQ15631 228 aaKnown RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 HSD17B12Q53GQ0 312 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 FIP1L1Q6UN15 594 aaKnown RBP12.79□□□□□ -0.36
IFT88-202ENST00000351808 GPRIN3Q6ZVF9 776 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 CALHM3Q86XJ0 350 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 KRTCAP2Q8N6L1 136 aa12.79□□□□□ -0.36
IFT88-202ENST00000351808 MYLPFQ96A32 169 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms