RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 SLC2A4P14672 509 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 HK3P52790 923 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 IL2P60568 153 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 RPL38P63173 70 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 HOXC5Q00444 222 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 RGS1Q08116 209 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 RIPPLY1Q0D2K3 151 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 PTGR1Q14914 329 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 PUS10Q3MIT2 529 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 GPR153Q6NV75 609 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 TMEM65Q6PI78 240 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 PLET1Q6UQ28 207 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 C9orf62Q8N4C0 152 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 DUSP18Q8NEJ0 188 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 OR13C4Q8NGS5 318 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 KCNJ9Q92806 393 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 FUBP3Q96I24 572 aaKnown RBP eCLIP9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 C8orf48Q96LL4 319 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 CDK15Q96Q40 435 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 SPATA9Q9BWV2 254 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 MRPL9Q9BYD2 267 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 MCOLN1Q9GZU1 580 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 SLC6A13Q9NSD5 602 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 MRPL39Q9NYK5 338 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 ZNF226Q9NYT6 803 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 CNOT2Q9NZN8 540 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 ASB1Q9Y576 335 aa9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 TDRD15B5MCY1 1934 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-202ENST00000348749 PRR23AA6NEV1 266 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 CASTOR2A6NHX0 329 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 C2orf81A6NN90 581 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 GFRA2O00451 464 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 DIRAS1O95057 198 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 TSPAN12O95859 305 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 LGI1O95970 557 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 HLA-DQB1P01920 261 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ATF4P18848 351 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 TNNI3P19429 210 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 PER3P56645 1201 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 RRAS2P62070 204 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 DAB2P98082 770 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 RUNX1T1Q06455 604 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 SNTA1Q13424 505 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 PDZK1Q5T2W1 519 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ERICH5Q6P6B1 374 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 FAM131AQ6UXB0 335 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 EIF3MQ7L2H7 374 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 SERPINA11Q86U17 422 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 LRRTM3Q86VH5 581 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 KIF18BQ86Y91 864 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 FAM9CQ8IZT9 166 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 STK40Q8N2I9 435 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 TRMT61AQ96FX7 289 aaKnown RBP9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 MSLNLQ96KJ4 702 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 KCNC2Q96PR1 638 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 OR5M11Q96RB7 305 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 GPR21Q99679 349 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 TM9SF2Q99805 663 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 MGME1Q9BQP7 344 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 C2orf49Q9BVC5 232 aaPredicted RBP9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 SPNS1Q9H2V7 528 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 NMUR1Q9HB89 426 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 AMBNQ9NP70 447 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 SERHLQ9NQF3 203 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 RAD18Q9NS91 495 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 CD274Q9NZQ7 290 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 PCDHB8Q9UN66 801 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ST3GAL5Q9UNP4 418 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ZNF670-ZNF695F2Z2N8 137 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ATP6V1G2-DDX39BF2Z307 99 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 I3L521 148 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 SLC28A1O00337 649 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 MYL12BO14950 172 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 GPR182O15218 404 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 RGS14O43566 566 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 RFPL3O75679 317 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 B3GAT3O94766 335 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 OTCP00480 354 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ESR1P03372 595 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 CSF2P04141 144 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 MYL12AP19105 171 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ITGB7P26010 798 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 PTPN6P29350 595 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 GJA5P36382 358 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 MAP2K3P46734 347 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 SOX9P48436 509 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 NUDT6P53370 316 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 CLDN20P56880 219 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 CYP4F2P78329 520 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 RING1Q06587 406 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 TUSC3Q13454 348 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 TP53BP2Q13625 1128 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 VEPH1Q14D04 833 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ABRAXAS2Q15018 415 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 IQCCQ4KMZ1 466 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 LCN1P1Q5VSP4 162 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 CD300LGQ6UXG3 332 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 DLK2Q6UY11 383 aa9.97□□□□□ -0.81
CHRNA1-202ENST00000348749 CBLL1Q75N03 491 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms