RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 COL4A3Q01955 1670 aa20.56■□□□□ 0.88
PTPN18-202ENST00000347849 AREL1O15033 823 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 CREG1O75629 220 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 SCELO95171 688 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 PAPLNO95428 1278 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 SERPINA1P01009 418 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 PDYNP01213 254 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 CYP4B1P13584 511 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 CD6P30203 668 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 AGAP7PQ5VUJ5 663 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 OR8D1Q8WZ84 308 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 USP7Q93009 1102 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 VPS35Q96QK1 796 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 EDDM13A0A1B0GTR0 161 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 AP2A2O94973 939 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 ADRB3P13945 408 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 ITGB7P26010 798 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 NCS1P62166 190 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 SYCE2Q6PIF2 218 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 SUSD1Q6UWL2 747 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 TRIM46Q7Z4K8 759 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 RASGRP3Q8IV61 690 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 KRTCAP2Q8N6L1 136 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 LMNTD1Q8N9Z9 388 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 MINDY2Q8NBR6 621 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 OR6Q1Q8NGQ2 317 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 RPP25Q9BUL9 199 aaKnown RBP20.55■□□□□ 0.88
PTPN18-202ENST00000347849 YIPF2Q9BWQ6 316 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 ACPTQ9BZG2 426 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 NECTIN3Q9NQS3 549 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 RBMX2Q9Y388 322 aaKnown RBP20.55■□□□□ 0.88
PTPN18-202ENST00000347849 PCDHGB1Q9Y5G3 927 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 PCDHGA10Q9Y5H3 936 aa20.55■□□□□ 0.88
PTPN18-202ENST00000347849 MUC22E2RYF6 1773 aaPredicted RBP20.54■□□□□ 0.88
PTPN18-202ENST00000347849 KCNE1BA0A087WTH5 132 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 C6P13671 934 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 PSMB9P28065 219 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 GJA4P35212 333 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 SERPINB10P48595 397 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 PFN3P60673 137 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 ELAVL3Q14576 367 aaKnown RBP20.54■□□□□ 0.88
PTPN18-202ENST00000347849 FKBP9P1Q75LS8 142 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 GPR149Q86SP6 731 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 SLC22A16Q86VW1 577 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 P2RY8Q86VZ1 359 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 MICU2Q8IYU8 434 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 CLHC1Q8NHS4 586 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 DPY30Q9C005 99 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 SLC6A13Q9NSD5 602 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 EIF3LQ9Y262 564 aaKnown RBP20.54■□□□□ 0.88
PTPN18-202ENST00000347849 PCDHB14Q9Y5E9 798 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 MYO1DO94832 1006 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 PGRP06401 933 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 WASP42768 502 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 BDKRB1P46663 353 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 HIST2H2ACQ16777 129 aaPredicted RBP20.54■□□□□ 0.88
PTPN18-202ENST00000347849 RUNDC3AQ59EK9 446 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 PLEKHG7Q6ZR37 379 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 B3GNT8Q7Z7M8 397 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 SCAIQ8N9R8 606 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 TMIEQ8NEW7 156 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 PPP3R2Q96LZ3 170 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 BARD1Q99728 777 aaKnown RBP20.54■□□□□ 0.88
PTPN18-202ENST00000347849 KXD1Q9BQD3 176 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 RHNO1Q9BSD3 238 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 RIBC2Q9H4K1 309 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 FBXO8Q9NRD0 319 aa20.54■□□□□ 0.88
PTPN18-202ENST00000347849 PCYT1BQ9Y5K3 369 aaPredicted RBP20.54■□□□□ 0.88
PTPN18-202ENST00000347849 LRRK1Q38SD2 2015 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 RGS14O43566 566 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 SEC22BO75396 215 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 PRLHRP49683 370 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 ZNF362Q5T0B9 420 aaPredicted RBP20.53■□□□□ 0.88
PTPN18-202ENST00000347849 PPP2R2DQ66LE6 453 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 PAGE2Q7Z2X7 111 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 CYP4Z1Q86W10 505 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 C10orf111Q8N326 155 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 LIX1Q8N485 282 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 ZNF513Q8N8E2 541 aaPredicted RBP20.53■□□□□ 0.88
PTPN18-202ENST00000347849 TIFAQ96CG3 184 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 YIPF6Q96EC8 236 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 ASPSCR1Q9BZE9 553 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 GDE1Q9NZC3 331 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 PNMA8BQ9ULN7 279 aaPredicted RBP20.53■□□□□ 0.88
PTPN18-202ENST00000347849 SLC5A10A0PJK1 596 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 CYP2A7P20853 494 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 ACVR2AP27037 513 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 TGFBR1P36897 503 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 RUNX3Q13761 415 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 KCNJ8Q15842 424 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 SYTL3Q4VX76 610 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 CDKL4Q5MAI5 379 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 LAIR1Q6GTX8 287 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 METTL2BQ6P1Q9 378 aaKnown RBP20.53■□□□□ 0.88
PTPN18-202ENST00000347849 LRRC70Q7Z2Q7 622 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 HIPK1Q86Z02 1210 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 SLC22A15Q8IZD6 547 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 DYNC2LI1Q8TCX1 351 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 OR52E6Q96RD3 313 aa20.53■□□□□ 0.88
PTPN18-202ENST00000347849 SH3GL1Q99961 368 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms