RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 SCG5P05408 212 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 PIPP12273 146 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-201ENST00000343524 CD1DP15813 335 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 GPC1P35052 558 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 MAP2K6P52564 334 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 EPHA4P54764 986 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 FOXA1P55317 472 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 TPI1P60174 286 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 RPA4Q13156 261 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 CAPSQ13938 189 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 POU4F3Q15319 338 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 MICAQ29983 383 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 SUPT20HL1Q3ZLR7 823 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 ZMAT1Q5H9K5 638 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 ANKRD34AQ69YU3 496 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 CORO6Q6QEF8 472 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 ZNF704Q6ZNC4 412 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-201ENST00000343524 ADGRD2Q7Z7M1 963 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 ATCAYQ86WG3 371 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 FBXO39Q8N4B4 442 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 OR56A4Q8NGH8 313 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 SLC22A8Q8TCC7 542 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 SLC35F5Q8WV83 523 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 CLEC4DQ8WXI8 215 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 RNF34Q969K3 372 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 NTAN1Q96AB6 310 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 SLC25A46Q96AG3 418 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 NXPE2Q96DL1 559 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 KLHL15Q96M94 604 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 FOPNLQ96NB1 174 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 PGLYRP2Q96PD5 576 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 C12orf57Q99622 126 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 MAGEB5Q9BZ81 275 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 RSPH9Q9H1X1 276 aaPredicted RBP7.87□□□□□ -1.15
ATG4A-201ENST00000343524 DBNDD1Q9H9R9 158 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 EXOSC4Q9NPD3 245 aaKnown RBP7.87□□□□□ -1.15
ATG4A-201ENST00000343524 EVA1BQ9NVM1 165 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 PFDN2Q9UHV9 154 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 NCKAP1Q9Y2A7 1128 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 SAMHD1Q9Y3Z3 626 aaKnown RBP7.87□□□□□ -1.15
ATG4A-201ENST00000343524 PCDHGA6Q9Y5G7 932 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 CSADQ9Y600 493 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 TSC2P49815 1807 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 ALPK3Q96L96 1907 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 ANK1P16157 1881 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 A0A096LPI6 279 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SLC12A8A0AV02 714 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 HYKKA2RU49 373 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 QSOX1O00391 747 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 PLA2G10O15496 165 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 FABP7O15540 132 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 OR4F21O95013 312 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 OLFM2O95897 454 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ECDO95905 644 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ACSM4P0C7M7 580 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ODC1P11926 461 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ITGB7P26010 798 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 MAPK1P28482 360 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 C21orf33P30042 268 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 RPL9P32969 192 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 RPIAP49247 311 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ABHD18Q0P651 414 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 TCP10Q12799 353 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 MED22Q15528 200 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 MAPKAPK3Q16644 382 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 C6orf136Q5SQH8 315 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 GPR158Q5T848 1215 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ATF7IP2Q5U623 682 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 CD276Q5ZPR3 534 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 OR4F3Q6IEY1 312 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ESRP1Q6NXG1 681 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ABHD15Q6UXT9 468 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SH3BP5LQ7L8J4 393 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 FAM131BQ86XD5 332 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SLC44A2Q8IWA5 706 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 TMEM132CQ8N3T6 1108 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 FAM160A2Q8N612 972 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 C1orf127Q8N9H9 656 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 WDR36Q8NI36 951 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 STAG3L4Q8TBR4 150 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 UTP15Q8TED0 518 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 EXT2Q93063 718 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 YIPF5Q969M3 257 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 INTS12Q96CB8 462 aaKnown RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 HPDLQ96IR7 371 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ERMAPQ96PL5 475 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 FCRL5Q96RD9 977 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 PTPN18Q99952 460 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 FSD1LQ9BXM9 530 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SLC19A3Q9BZV2 496 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 RNF167Q9H6Y7 350 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SP110Q9HB58 689 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 CD93Q9NPY3 652 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SLC35C2Q9NQQ7 365 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 CATSPERZQ9NTU4 200 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 IMPAD1Q9NX62 359 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SH3BP4Q9P0V3 963 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 HECAQ9UBI9 543 aaPredicted RBP7.86□□□□□ -1.15
ATG4A-201ENST00000343524 SIX4Q9UIU6 781 aa7.86□□□□□ -1.15
ATG4A-201ENST00000343524 ZNF490Q9ULM2 529 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms