RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 STXBP5Q5T5C0 1151 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 TMPRSS7Q7RTY8 843 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 KIAA0895Q8NCT3 520 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 AGBL3Q8NEM8 1001 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ZNF596Q8TC21 504 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 MAP3K14Q99558 947 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 NUDT16L1Q9BRJ7 211 aaKnown RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 TMEM121BQ9BXQ6 578 aaPredicted RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 USP42Q9H9J4 1324 aaKnown RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 PLXNA4Q9HCM2 1894 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 GLYATL1P3A0A0U1RQE8 302 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 RPS10-NUDT3A0A1W2PQS6 291 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ATG12O94817 140 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 MT-ND1P03886 318 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 COL6A2P12110 1019 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 RPS10P46783 165 aaKnown RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 SCNN1GP51170 649 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 TAS2R20P59543 309 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 MAMLD1Q13495 774 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ELOAQ14241 798 aaKnown RBP6.01□□□□□ -1.45
VCAN-203ENST00000343200 OR10K2Q6IF99 312 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 CD163Q86VB7 1156 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 JAGN1Q8N5M9 183 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 CISHQ9NSE2 258 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 SLC17A7Q9P2U7 560 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 PCDHAC2Q9Y5I4 1007 aa6.01□□□□□ -1.45
VCAN-203ENST00000343200 ZNF587BE7ETH6 402 aa6□□□□□ -1.45
VCAN-203ENST00000343200 NPC1O15118 1278 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RAD51DO75771 328 aa6□□□□□ -1.45
VCAN-203ENST00000343200 BCAS2O75934 225 aaPredicted RBP6□□□□□ -1.45
VCAN-203ENST00000343200 SEC14L2O76054 403 aa6□□□□□ -1.45
VCAN-203ENST00000343200 TGFB3P10600 412 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ALPPL2P10696 532 aa6□□□□□ -1.45
VCAN-203ENST00000343200 LAMP2P13473 410 aa6□□□□□ -1.45
VCAN-203ENST00000343200 SNRPD2P62316 118 aaKnown RBP6□□□□□ -1.45
VCAN-203ENST00000343200 SMYD5Q6GMV2 418 aa6□□□□□ -1.45
VCAN-203ENST00000343200 MOXD1Q6UVY6 613 aa6□□□□□ -1.45
VCAN-203ENST00000343200 LAS2Q8IYD9 372 aa6□□□□□ -1.45
VCAN-203ENST00000343200 NINJ1Q92982 152 aa6□□□□□ -1.45
VCAN-203ENST00000343200 HLA-CQ95604 372 aa6□□□□□ -1.45
VCAN-203ENST00000343200 POLR1EQ9GZS1 481 aaKnown RBP6□□□□□ -1.45
VCAN-203ENST00000343200 TBX22Q9Y458 520 aa6□□□□□ -1.45
VCAN-203ENST00000343200 MON2Q7Z3U7 1717 aa6□□□□□ -1.45
VCAN-203ENST00000343200 PEX11AO75192 247 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RENP00797 406 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ANXA8P13928 327 aa6□□□□□ -1.45
VCAN-203ENST00000343200 UGT2B7P16662 529 aa6□□□□□ -1.45
VCAN-203ENST00000343200 POLR2CP19387 275 aaPredicted RBP6□□□□□ -1.45
VCAN-203ENST00000343200 ALDH7A1P49419 539 aaKnown RBP6□□□□□ -1.45
VCAN-203ENST00000343200 Q3ZCU0 254 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RNF212Q495C1 297 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RNASE10Q5GAN6 216 aaKnown RBP6□□□□□ -1.45
VCAN-203ENST00000343200 LRRC38Q5VT99 294 aa6□□□□□ -1.45
VCAN-203ENST00000343200 LIPKQ5VXJ0 399 aa6□□□□□ -1.45
VCAN-203ENST00000343200 PSTKQ8IV42 348 aaKnown RBP6□□□□□ -1.45
VCAN-203ENST00000343200 ZNF101Q8IZC7 436 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CDT1Q9H211 546 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ZBTB20Q9HC78 741 aaPredicted RBP6□□□□□ -1.45
VCAN-203ENST00000343200 RBM22Q9NW64 420 aaKnown RBP eCLIP6□□□□□ -1.45
VCAN-203ENST00000343200 PARPBPQ9NWS1 579 aa6□□□□□ -1.45
VCAN-203ENST00000343200 TNRQ92752 1358 aa6□□□□□ -1.45
VCAN-203ENST00000343200 hCG_2039718K7EN88 272 aa6□□□□□ -1.45
VCAN-203ENST00000343200 SMAD9O15198 467 aaKnown RBP6□□□□□ -1.45
VCAN-203ENST00000343200 OR8U9P0C7N5 309 aa6□□□□□ -1.45
VCAN-203ENST00000343200 IRF1P10914 325 aa6□□□□□ -1.45
VCAN-203ENST00000343200 IMPA1P29218 277 aa6□□□□□ -1.45
VCAN-203ENST00000343200 GCNT1Q02742 428 aa6□□□□□ -1.45
VCAN-203ENST00000343200 KLF10Q13118 480 aa6□□□□□ -1.45
VCAN-203ENST00000343200 SELPLGQ14242 412 aa6□□□□□ -1.45
VCAN-203ENST00000343200 TEX261Q6UWH6 196 aa6□□□□□ -1.45
VCAN-203ENST00000343200 TRAPPC5Q8IUR0 188 aa6□□□□□ -1.45
VCAN-203ENST00000343200 PUM2Q8TB72 1066 aaKnown RBP eCLIP6□□□□□ -1.45
VCAN-203ENST00000343200 FANK1Q8TC84 345 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CPT1CQ8TCG5 803 aa6□□□□□ -1.45
VCAN-203ENST00000343200 BORCS8Q96FH0 119 aa6□□□□□ -1.45
VCAN-203ENST00000343200 MAPKAP1Q9BPZ7 522 aa6□□□□□ -1.45
VCAN-203ENST00000343200 TMEM27Q9HBJ8 222 aa6□□□□□ -1.45
VCAN-203ENST00000343200 TAS2R16Q9NYV7 291 aa6□□□□□ -1.45
VCAN-203ENST00000343200 U3KQ87 197 aa6□□□□□ -1.45
VCAN-203ENST00000343200 C2orf92A0A1B0GVN3 265 aa6□□□□□ -1.45
VCAN-203ENST00000343200 F5H5P2 479 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RBAK-RBAKDNI3L0D1 243 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CBX4O00257 560 aa6□□□□□ -1.45
VCAN-203ENST00000343200 BCKDHAP12694 445 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RAB5AP20339 215 aa6□□□□□ -1.45
VCAN-203ENST00000343200 CES1P23141 567 aa6□□□□□ -1.45
VCAN-203ENST00000343200 RBMS1P29558 406 aaKnown RBP6□□□□□ -1.45
VCAN-203ENST00000343200 CMPK1P30085 196 aa6□□□□□ -1.45
VCAN-203ENST00000343200 SUMO1P63165 101 aaKnown RBP6□□□□□ -1.45
VCAN-203ENST00000343200 CHIT1Q13231 466 aa6□□□□□ -1.45
VCAN-203ENST00000343200 VAMP3Q15836 100 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ZACNQ401N2 412 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ZMAT1Q5H9K5 638 aa6□□□□□ -1.45
VCAN-203ENST00000343200 P4HA3Q7Z4N8 544 aa6□□□□□ -1.45
VCAN-203ENST00000343200 DCP1BQ8IZD4 617 aaKnown RBP6□□□□□ -1.45
VCAN-203ENST00000343200 PROKR2Q8NFJ6 384 aa6□□□□□ -1.45
VCAN-203ENST00000343200 OR10A6Q8NH74 314 aa6□□□□□ -1.45
VCAN-203ENST00000343200 ZNF675Q8TD23 568 aa6□□□□□ -1.45
VCAN-203ENST00000343200 EXTL1Q92935 676 aa6□□□□□ -1.45
VCAN-203ENST00000343200 LENG9Q96B70 501 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms