RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 ZNF860A6NHJ4 632 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 OXTRP30559 389 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 KCNJ11Q14654 390 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 LASP1Q14847 261 aaKnown RBP14.54□□□□□ -0.08
UBE3B-202ENST00000342494 PDCD4Q53EL6 469 aaKnown RBP14.54□□□□□ -0.08
UBE3B-202ENST00000342494 ZNF852Q6ZMS4 543 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 RAB43Q86YS6 212 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 CILP2Q8IUL8 1156 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 LRRC58Q96CX6 371 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 TGM7Q96PF1 710 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 RBP7Q96R05 134 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 DEFB126Q9BYW3 111 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 RC3H2Q9HBD1 1191 aaKnown RBP14.54□□□□□ -0.08
UBE3B-202ENST00000342494 APOBEC3BQ9UH17 382 aaKnown RBP14.54□□□□□ -0.08
UBE3B-202ENST00000342494 ZNF639Q9UID6 485 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 RNF11Q9Y3C5 154 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 MAU2Q9Y6X3 613 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 FAM159BA6NKW6 160 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 EIF1AYO14602 144 aaKnown RBP14.54□□□□□ -0.08
UBE3B-202ENST00000342494 RPLP0P05388 317 aaKnown RBP14.54□□□□□ -0.08
UBE3B-202ENST00000342494 OR2L8Q8NGY9 312 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 MED28Q9H204 178 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 FTSJ1Q9UET6 329 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 CXorf49A8MYA2 514 aaPredicted RBP14.54□□□□□ -0.08
UBE3B-202ENST00000342494 E7EQ34 232 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 TLR4O00206 839 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 DNAJA1P31689 397 aaKnown RBP14.54□□□□□ -0.08
UBE3B-202ENST00000342494 ELAVL3Q14576 367 aaKnown RBP14.54□□□□□ -0.08
UBE3B-202ENST00000342494 PAMR1Q6UXH9 720 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 OR4K14Q8NGD5 310 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 TNFRSF10DQ9UBN6 386 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 PRODH2Q9UF12 536 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 WDR45Q9Y484 360 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 PEX16Q9Y5Y5 336 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 SNED1Q8TER0 1413 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 OR6C74A6NCV1 312 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 GLOD5A6NK44 160 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 M0QX08 132 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 ADAMTS3O15072 1205 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 DLX3O60479 287 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 PITPNAQ00169 270 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 PON3Q15166 354 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 LINC00471Q8N535 108 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 THEM6Q8WUY1 208 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 FAM120CQ9NX05 1096 aaKnown RBP14.54□□□□□ -0.08
UBE3B-202ENST00000342494 GLS2Q9UI32 602 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 DLGAP4Q9Y2H0 992 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 PIAS3Q9Y6X2 628 aa14.54□□□□□ -0.08
UBE3B-202ENST00000342494 SOX1O00570 391 aaPredicted RBP14.53□□□□□ -0.08
UBE3B-202ENST00000342494 CDC123O75794 336 aaPredicted RBP14.53□□□□□ -0.08
UBE3B-202ENST00000342494 SEMA3DO95025 777 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 GSRP00390 522 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 BMPR1AP36894 532 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 PLP2Q04941 152 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 EIF4HQ15056 248 aaKnown RBP14.53□□□□□ -0.08
UBE3B-202ENST00000342494 FAM182AQ5T1J6 154 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 TMEM17Q86X19 198 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 TXNDC5Q8NBS9 432 aaKnown RBP14.53□□□□□ -0.08
UBE3B-202ENST00000342494 GLYATL1Q969I3 302 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 IL4I1Q96RQ9 567 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 CD244Q9BZW8 370 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 MS4A12Q9NXJ0 267 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 GRHPRQ9UBQ7 328 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 POMPQ9Y244 141 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 PADI2Q9Y2J8 665 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 ZNF670-ZNF695F2Z2N8 137 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 H3BNX3 289 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 EPOP01588 193 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 VEGFBP49765 207 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 MEF2AQ02078 507 aaPredicted RBP14.53□□□□□ -0.08
UBE3B-202ENST00000342494 OLIG2Q13516 323 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 RUNX3Q13761 415 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 THOC7Q6I9Y2 204 aaKnown RBP14.53□□□□□ -0.08
UBE3B-202ENST00000342494 NPAS3Q8IXF0 933 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 FCGR1BQ92637 280 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 KCNJ9Q92806 393 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 KIAA1191Q96A73 305 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 TLCD1Q96CP7 247 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 CD180Q99467 661 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 KAT8Q9H7Z6 458 aaKnown RBP14.53□□□□□ -0.08
UBE3B-202ENST00000342494 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.53□□□□□ -0.08
UBE3B-202ENST00000342494 SNTG1Q9NSN8 517 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 TAS2R9Q9NYW1 312 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 MAFFQ9ULX9 164 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 FARS2O95363 451 aaKnown RBP14.53□□□□□ -0.08
UBE3B-202ENST00000342494 SYPP08247 313 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 PFKLP17858 780 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 PEX2P28328 305 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 HNF1BP35680 557 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 GGT5P36269 586 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 SMSP52788 366 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 CEBPGP53567 150 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 OGDHQ02218 1023 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 RING1Q06587 406 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 SAGE2PA6NJ88 616 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 ZNF878C9JN71 531 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 AREL1O15033 823 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 RFPL2O75678 378 aa14.53□□□□□ -0.08
UBE3B-202ENST00000342494 S100A9P06702 114 aaKnown RBP14.53□□□□□ -0.08
UBE3B-202ENST00000342494 FBLP22087 321 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms