RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 FAM53BQ14153 422 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 FBXO48Q5FWF7 155 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 SULT1C3Q6IMI6 304 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 TMEM214Q6NUQ4 689 aaKnown RBP14.62□□□□□ -0.07
VAPA-201ENST00000340541 NXPE4Q6UWF7 544 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 TBC1D1Q86TI0 1168 aaPredicted RBP14.62□□□□□ -0.07
VAPA-201ENST00000340541 ASPGQ86U10 573 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 RAB43Q86YS6 212 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 GALNT11Q8NCW6 608 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 DCAKDQ8WVC6 231 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 ISL2Q96A47 359 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 NXNL1Q96CM4 212 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 DRC3Q9H069 523 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 EPB41L4BQ9H329 900 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 PELI2Q9HAT8 420 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 NMRAL1Q9HBL8 299 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 PTBP2Q9UKA9 531 aaKnown RBP14.62□□□□□ -0.07
VAPA-201ENST00000340541 DYRK1BQ9Y463 629 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 ASB1Q9Y576 335 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 KCNE2Q9Y6J6 123 aa14.62□□□□□ -0.07
VAPA-201ENST00000340541 A0A087WUV0 522 aaPredicted RBP14.61□□□□□ -0.07
VAPA-201ENST00000340541 A0A087X1B8 175 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 A0A096LPK6 155 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 A0A0A6YYC8 382 aaPredicted RBP14.61□□□□□ -0.07
VAPA-201ENST00000340541 I3L1I5 382 aaPredicted RBP14.61□□□□□ -0.07
VAPA-201ENST00000340541 PRAMEF4O60810 478 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 KERAO60938 352 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 VPS4BO75351 444 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 WDR47O94967 919 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 ABHD2P08910 425 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 MYBL2P10244 700 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 MTHFD2P13995 350 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 FBLP22087 321 aaKnown RBP14.61□□□□□ -0.07
VAPA-201ENST00000340541 VARSP26640 1264 aaKnown RBP14.61□□□□□ -0.07
VAPA-201ENST00000340541 GCAP28676 217 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 GRK3P35626 688 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 SCTRP47872 440 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 SERPINB8P50452 374 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 PGDP52209 483 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 MLLT10P55197 1068 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 PRAMEF9Q5VWM5 478 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 SLCO4C1Q6ZQN7 724 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 SHISA6Q6ZSJ9 500 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 TRMT10CQ7L0Y3 403 aaKnown RBP14.61□□□□□ -0.07
VAPA-201ENST00000340541 PRSS41Q7RTY9 318 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 CCDC91Q7Z6B0 441 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 TMPRSS11BQ86T26 416 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 GSPT2Q8IYD1 628 aaKnown RBP14.61□□□□□ -0.07
VAPA-201ENST00000340541 SHISA5Q8N114 240 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 TCAIMQ8N3R3 496 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 ANKRD53Q8N9V6 530 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 KCT2Q8NC54 265 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 CAMKVQ8NCB2 501 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 STAG3L4Q8TBR4 150 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 STT3BQ8TCJ2 826 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 SLC13A3Q8WWT9 602 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 ESAMQ96AP7 390 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 MOCOSQ96EN8 888 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 GPR78Q96P69 363 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 SLC25A23Q9BV35 468 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 ING2Q9H160 280 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 SOX17Q9H6I2 414 aaPredicted RBP14.61□□□□□ -0.07
VAPA-201ENST00000340541 ACSS2Q9NR19 701 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 ZNF180Q9UJW8 692 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 NXT1Q9UKK6 140 aaKnown RBP14.61□□□□□ -0.07
VAPA-201ENST00000340541 RNF112Q9ULX5 631 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 VPS4AQ9UN37 437 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 CDC14AQ9UNH5 594 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 SCN3AQ9NY46 2000 aa14.61□□□□□ -0.07
VAPA-201ENST00000340541 USP9YO00507 2555 aaPredicted RBP14.61□□□□□ -0.07
VAPA-201ENST00000340541 TTLL8A6PVC2 850 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 FFAR3O14843 346 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 GPR42O15529 346 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 RIPK2O43353 540 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 OR1F1O43749 312 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 CEACAM4O75871 244 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 IPO13O94829 963 aaKnown RBP14.6□□□□□ -0.07
VAPA-201ENST00000340541 INHBAP08476 426 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 ZGLP1P0C6A0 271 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 EPORP19235 508 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 MMP11P24347 488 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 TYK2P29597 1187 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 HSPA7P48741 367 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 CDC16Q13042 620 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 VWA2Q5GFL6 755 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 MED25Q71SY5 747 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 PDSS2Q86YH6 399 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 PLD6Q8N2A8 252 aaKnown RBP14.6□□□□□ -0.07
VAPA-201ENST00000340541 EFCAB3Q8N7B9 438 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 EIF1ADQ8N9N8 165 aaKnown RBP14.6□□□□□ -0.07
VAPA-201ENST00000340541 OR9A4Q8NGU2 314 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 RHEBL1Q8TAI7 183 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 EXT2Q93063 718 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 MMABQ96EY8 250 aaPredicted RBP14.6□□□□□ -0.07
VAPA-201ENST00000340541 MESP1Q9BRJ9 268 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 DNAJC11Q9NVH1 559 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 P4HTMQ9NXG6 502 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 WWOXQ9NZC7 414 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 NUDT4Q9NZJ9 180 aa14.6□□□□□ -0.07
VAPA-201ENST00000340541 CD274Q9NZQ7 290 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms