RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 C5orf22Q49AR2 442 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-201ENST00000340437 Q6ZVU0 165 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 HMGN2P46Q86SG4 172 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 TMPRSS11BQ86T26 416 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 TAGAPQ8N103 731 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 LGI4Q8N135 537 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 VPS37AQ8NEZ2 397 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 NFKBIDQ8NI38 313 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 GGHQ92820 318 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 VMP1Q96GC9 406 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 ACAT2Q9BWD1 397 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 ZNF556Q9HAH1 456 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 MS4A12Q9NXJ0 267 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 FAM32AQ9Y421 112 aaKnown RBP13.89□□□□□ -0.19
CPSF7-201ENST00000340437 CHD5Q8TDI0 1954 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 TFECO14948 347 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-201ENST00000340437 ASNA1O43681 348 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 SSX4O60224 188 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 PTHP01270 115 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 CKMT1AP12532 417 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 CD9P21926 228 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 RPS3P23396 243 aaKnown RBP eCLIP13.89□□□□□ -0.19
CPSF7-201ENST00000340437 GABRR2P28476 465 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 CHI3L1P36222 383 aaPredicted RBP13.89□□□□□ -0.19
CPSF7-201ENST00000340437 MXD1Q05195 221 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 GAB1Q13480 694 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 ATAD3BQ5T9A4 648 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 Q6ZVL8 140 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 CHST14Q8NCH0 376 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 APH1BQ8WW43 257 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 DMRTB1Q96MA1 342 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 CLSTN3Q9BQT9 956 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 NUAK2Q9H093 628 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 CCNB1IP1Q9NPC3 277 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 TMEM45AQ9NWC5 275 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 EHD3Q9NZN3 535 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 B4GALT6Q9UBX8 382 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 AP3M1Q9Y2T2 418 aa13.89□□□□□ -0.19
CPSF7-201ENST00000340437 TMEM88BA6NKF7 163 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 SOX14O95416 240 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 CD22P20273 847 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 TCEA1P23193 301 aaKnown RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 PTSQ03393 145 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 ELP6Q0PNE2 266 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 ELAVL2Q12926 359 aaKnown RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 KEAP1Q14145 624 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 THOC6Q86W42 341 aaKnown RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 AMER2Q8N7J2 671 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 EHD1Q9H4M9 534 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 C11orf16Q9NQ32 467 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 VWA8A3KMH1 1905 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 CTDSP2O14595 271 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 COPZ1P61923 177 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 PPIGQ13427 754 aaKnown RBP eCLIP13.88□□□□□ -0.191e-7■■■□□ 15.3
CPSF7-201ENST00000340437 TAB1Q15750 504 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 DPY19L3Q6ZPD9 716 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 USP45Q70EL2 814 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 LYSMD2Q8IV50 215 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 CELF2-AS1Q8N7Q2 184 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 OR2AP1Q8NGE2 309 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 CSGALNACT1Q8TDX6 532 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 CIDECQ96AQ7 238 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 ASCC3Q8N3C0 2202 aaKnown RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 M0R082 166 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 TPST2O60704 377 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 COQ9O75208 318 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 C6orf47O95873 294 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 RPLP2P05387 115 aaKnown RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 TGFBR2P37173 567 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 RPS13P62277 151 aaKnown RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 SRSF11Q05519 484 aaKnown RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 IRF5Q13568 498 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 TSTQ16762 297 aaKnown RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 PROX2Q3B8N5 592 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 ZC3H12BQ5HYM0 836 aaKnown RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 CBLL1Q75N03 491 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 LSRQ86X29 649 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 DCAF4L2Q8NA75 395 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 CNPPD1Q9BV87 410 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 OR51B5Q9H339 312 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 ZNF334Q9HCZ1 680 aaPredicted RBP13.88□□□□□ -0.19
CPSF7-201ENST00000340437 MAN2B2Q9Y2E5 1009 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 MICAL3Q7RTP6 2002 aa13.88□□□□□ -0.19
CPSF7-201ENST00000340437 H3BM21 787 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 PCDH17O14917 1159 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 HLA-EP13747 358 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 RPS26P62854 115 aaKnown RBP13.87□□□□□ -0.19
CPSF7-201ENST00000340437 TCTN1Q2MV58 587 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 GPR33Q49SQ1 333 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 ZNF697Q5TEC3 545 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 OTOP2Q7RTS6 562 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 SERPINA11Q86U17 422 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 SORCS1Q8WY21 1168 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 MYDGFQ969H8 173 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 OR5M11Q96RB7 305 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 PKP4Q99569 1192 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 TTLL2Q9BWV7 592 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 QPCTLQ9NXS2 382 aa13.87□□□□□ -0.19
CPSF7-201ENST00000340437 PCDHGB3Q9Y5G1 929 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms