RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 NSUN5Q96P11 429 aaKnown RBP11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 TMEM237Q96Q45 408 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 SH3GL2Q99962 352 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 PAIP2Q9BPZ3 127 aaKnown RBP11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 SPRY4Q9C004 299 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 ZBTB26Q9HCK0 441 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 CUTCQ9NTM9 273 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 NDOR1Q9UHB4 597 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF490Q9ULM2 529 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 CDC14AQ9UNH5 594 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 RNF11Q9Y3C5 154 aa11.37□□□□□ -0.59
SPTLC1-202ENST00000337841 TMEM120BA0PK00 339 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 TMEM8BA6NDV4 472 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 H3BMH7 237 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 MEN1O00255 615 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 RAD1O60671 282 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 PRAMEF4O60810 478 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 CLEC3AO75596 197 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 SASH3O75995 380 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 TIAF1O95411 115 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 CTSBP07858 339 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 SERPINA6P08185 405 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 PCNAP12004 261 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF28P17035 718 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 TSPAN8P19075 237 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 ETV4P43268 484 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 SERPINB4P48594 390 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 ATP1A2P50993 1020 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 PKNOX1P55347 436 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 PCBP4P57723 403 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 STXBP1P61764 594 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 PHEXP78562 749 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 LCP2Q13094 533 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 MPP2Q14168 576 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 PCLAFQ15004 111 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 CPSF6Q16630 551 aaKnown RBP eCLIP11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 PRAMEF17Q5VTA0 474 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 PRAMEF9Q5VWM5 478 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 RHBDD2Q6NTF9 364 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 UNQ6494/PRO21346Q6UXR6 183 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 GPRIN3Q6ZVF9 776 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 TTLL10Q6ZVT0 673 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 VN1R4Q7Z5H5 301 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 LAS2Q8IYD9 372 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 NLGN4XQ8N0W4 816 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 GALNT6Q8NCL4 622 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF248Q8NDW4 579 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 NLGN4YQ8NFZ3 816 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 OR7G3Q8NG95 312 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 OR4F6Q8NGB9 312 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 NT5CQ8TCD5 201 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 PROKR1Q8TCW9 393 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 CCT6BQ92526 530 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 LRFN5Q96NI6 719 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 ZNF382Q96SR6 550 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 DPH2Q9BQC3 489 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 TRMOQ9BU70 441 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 GATA5Q9BWX5 397 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 SPNS1Q9H2V7 528 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 RHBGQ9H310 441 aa11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 EML4Q9HC35 981 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 RUVBL1Q9Y265 456 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-202ENST00000337841 WDR91A4D1P6 747 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 H0YIV9 168 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 DYNC1I1O14576 645 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 DSCR3O14972 297 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 RRP8O43159 456 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 NDUFS4O43181 175 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 NPHS1O60500 1241 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 DLGAP3O95886 979 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 CD63P08962 238 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 LIPCP11150 499 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 CD22P20273 847 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 PIK3CBP42338 1070 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 DCDP81605 110 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 TGM3Q08188 693 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 ABHD18Q0P651 414 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 IFT88Q13099 833 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 GPS2Q13227 327 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 FAM53BQ14153 422 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 ZRSR2Q15696 482 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 HKDC1Q2TB90 917 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 HSP90B2PQ58FF3 399 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 C10orf62Q5T681 223 aaPredicted RBP11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 NIPAL1Q6NVV3 410 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 PRMT9Q6P2P2 845 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 CHSY3Q70JA7 882 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 RPS27LQ71UM5 84 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 CACNA2D3Q8IZS8 1091 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 IL22RA1Q8N6P7 574 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 ANKRD53Q8N9V6 530 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 OR52B6Q8NGF0 335 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 CREB3L4Q8TEY5 395 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 MR1Q95460 341 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 CDK15Q96Q40 435 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 C17orf62Q9BQA9 187 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 DPH1Q9BZG8 443 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 GSTO2Q9H4Y5 243 aa11.35□□□□□ -0.59
SPTLC1-202ENST00000337841 ACSS2Q9NR19 701 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms