RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 CLCA1A8K7I4 914 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 SAP18O00422 153 aaKnown RBP12.84□□□□□ -0.35
COL2A1-201ENST00000337299 OR1I1O60431 355 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 MATN4O95460 622 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 S1PR4O95977 384 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 PDGFAP04085 211 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 ELNP15502 786 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 FLT3LGP49771 235 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 PCDH1Q08174 1060 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 OLFML2AQ68BL7 652 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 SMARCD3Q6STE5 483 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 RBFAQ8N0V3 343 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 FTMTQ8N4E7 242 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 NMUR1Q9HB89 426 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 PHRF1Q9P1Y6 1649 aaKnown RBP12.84□□□□□ -0.35
COL2A1-201ENST00000337299 DCLK1O15075 740 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 GBAP04062 536 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 PTNP21246 168 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 DRD5P21918 477 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 P2RX3P56373 397 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 ZXDBP98169 803 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 SPATS1Q496A3 300 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 LIN54Q6MZP7 749 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 LAX1Q8IWV1 398 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 RGL4Q8IZJ4 473 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 C2orf73Q8N5S3 287 aaPredicted RBP12.84□□□□□ -0.35
COL2A1-201ENST00000337299 SLC5A8Q8N695 610 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 BBS4Q96RK4 519 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 AMBRA1Q9C0C7 1298 aa12.84□□□□□ -0.35
COL2A1-201ENST00000337299 NRCAMQ92823 1304 aa12.83□□□□□ -0.35
COL2A1-201ENST00000337299 LCHNA4D1U4 455 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 JRKO75564 520 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 ERAL1O75616 437 aaKnown RBP12.83□□□□□ -0.36
COL2A1-201ENST00000337299 CPNE6O95741 557 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 NPPAP01160 153 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 JUNBP17275 347 aaPredicted RBP12.83□□□□□ -0.36
COL2A1-201ENST00000337299 IFNGR2P38484 337 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 RGS6P49758 472 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 MLLT10P55197 1068 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 INCA1Q0VD86 236 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 MAP2K5Q13163 448 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 CRB2Q5IJ48 1285 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 ANXA8L1Q5VT79 327 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 ARL9Q6T311 187 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 CFAP77Q6ZQR2 320 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 GRAMD2AQ8IUY3 354 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 SLC43A3Q8NBI5 491 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 OR2T35Q8NGX2 323 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 CCM2Q9BSQ5 444 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 HDHD5Q9BXW7 423 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 RBCK1Q9BYM8 510 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 PAK6Q9NQU5 681 aaPredicted RBP12.83□□□□□ -0.36
COL2A1-201ENST00000337299 MTMR10Q9NXD2 777 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 GLTPQ9NZD2 209 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 MAN2B2Q9Y2E5 1009 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 TCRBV5S1A1TA0A578 114 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 DNAJB1P25685 340 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 NAE1Q13564 534 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 TAZQ16635 292 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 NADSYN1Q6IA69 706 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 ZNF367Q7RTV3 350 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 BEST4Q8NFU0 473 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 MRGPRX2Q96LB1 330 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 TEX37Q96LM6 180 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 AKIP1Q9NQ31 210 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 ZNF69Q9UC07 566 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 PCDHB7Q9Y5E2 793 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 GPR45Q9Y5Y3 372 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 NARSO43776 548 aaKnown RBP12.83□□□□□ -0.36
COL2A1-201ENST00000337299 OGNP20774 298 aaKnown RBP12.83□□□□□ -0.36
COL2A1-201ENST00000337299 ACSL1P33121 698 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 MAGEA3P43357 314 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 AVPR1BP47901 424 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 MANFP55145 182 aaKnown RBP12.83□□□□□ -0.36
COL2A1-201ENST00000337299 SNTA1Q13424 505 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 FAM205BPQ63HN1 556 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 FAM180AQ6UWF9 173 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 B3GNT9Q6UX72 402 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 SAMD12Q8N8I0 201 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 CEP76Q8TAP6 659 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 MAL2Q969L2 176 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 CSF3RQ99062 836 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 MND1Q9BWT6 205 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 CDADC1Q9BWV3 514 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 FBXO44Q9H4M3 255 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 TNFRSF12AQ9NP84 129 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 SLAMF7Q9NQ25 335 aa12.83□□□□□ -0.36
COL2A1-201ENST00000337299 MRPL15Q9P015 296 aaKnown RBP12.83□□□□□ -0.36
COL2A1-201ENST00000337299 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.82□□□□□ -0.36
COL2A1-201ENST00000337299 TRBC2A0A5B9 178 aa12.82□□□□□ -0.36
COL2A1-201ENST00000337299 H3BUI4 141 aa12.82□□□□□ -0.36
COL2A1-201ENST00000337299 LYRM1O43325 122 aa12.82□□□□□ -0.36
COL2A1-201ENST00000337299 ECDO95905 644 aaPredicted RBP12.82□□□□□ -0.36
COL2A1-201ENST00000337299 PROS1P07225 676 aa12.82□□□□□ -0.36
COL2A1-201ENST00000337299 ALAS2P22557 587 aa12.82□□□□□ -0.36
COL2A1-201ENST00000337299 PSMD4P55036 377 aaKnown RBP12.82□□□□□ -0.36
COL2A1-201ENST00000337299 GPR19Q15760 415 aa12.82□□□□□ -0.36
COL2A1-201ENST00000337299 SWI5Q1ZZU3 235 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms