RNA–Protein interactions for RNA: ENST00000334133.8

RFTN1-201, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RFTN1, Length 2,982 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-201ENST00000334133 FAM120CQ9NX05 1096 aaKnown RBP18.22■□□□□ 0.51
RFTN1-201ENST00000334133 TRANK1O15050 2925 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 NUMA1Q14980 2115 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 LRRK1Q38SD2 2015 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 LSM3P62310 102 aaKnown RBP18.22■□□□□ 0.51
RFTN1-201ENST00000334133 MED27Q6P2C8 311 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 CCDC81Q6ZN84 652 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 OR52J3Q8NH60 311 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 FCRL1Q96LA6 429 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 KIF17Q9P2E2 1029 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 ERVK-18Q9QC07 812 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 TDRKHQ9Y2W6 561 aaKnown RBP18.22■□□□□ 0.51
RFTN1-201ENST00000334133 IRAK3Q9Y616 596 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 DOCK9Q9BZ29 2069 aa18.22■□□□□ 0.51
RFTN1-201ENST00000334133 KIAA0355O15063 1070 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 C6orf47O95873 294 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 C6P13671 934 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 DDX6P26196 483 aaKnown RBP eCLIP18.21■□□□□ 0.51
RFTN1-201ENST00000334133 ALDH4A1P30038 563 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 MAGEA2P43356 314 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 HBA1P69905 142 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 NFATC3Q12968 1075 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 KCNC3Q14003 757 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 COMMD6Q7Z4G1 85 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 MMAAQ8IVH4 418 aaKnown RBP18.21■□□□□ 0.51
RFTN1-201ENST00000334133 NPAS3Q8IXF0 933 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 CHTF18Q8WVB6 975 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 DTNBP1Q96EV8 351 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 RUBCNLQ9H714 662 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 TRIM39Q9HCM9 518 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 RHBDL2Q9NX52 303 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 SAGE1Q9NXZ1 904 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 SPASTQ9UBP0 616 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 TSPAN11A1L157 253 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 UGDHO60701 494 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 SEC14L2O76054 403 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 ANGPTL1O95841 491 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 CCNA2P20248 432 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 MYBPC3Q14896 1274 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 FAM83HQ6ZRV2 1179 aaPredicted RBP18.21■□□□□ 0.51
RFTN1-201ENST00000334133 PLA2G15Q8NCC3 412 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 SPPL2AQ8TCT8 520 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 RDH12Q96NR8 316 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 VPS35Q96QK1 796 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 NODALQ96S42 347 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 TESMINQ9Y4I5 508 aa18.21■□□□□ 0.51
RFTN1-201ENST00000334133 POP7O75817 140 aaKnown RBP18.21■□□□□ 0.5
RFTN1-201ENST00000334133 ZNF8P17098 575 aaPredicted RBP18.21■□□□□ 0.5
RFTN1-201ENST00000334133 TIA1P31483 386 aaKnown RBP eCLIP18.21■□□□□ 0.5
RFTN1-201ENST00000334133 ARHGDIAP52565 204 aa18.21■□□□□ 0.5
RFTN1-201ENST00000334133 CYP4F2P78329 520 aa18.21■□□□□ 0.5
RFTN1-201ENST00000334133 RGNQ15493 299 aa18.21■□□□□ 0.5
RFTN1-201ENST00000334133 CAPN13Q6MZZ7 669 aaPredicted RBP18.21■□□□□ 0.5
RFTN1-201ENST00000334133 NUS1Q96E22 293 aa18.21■□□□□ 0.5
RFTN1-201ENST00000334133 CERS4Q9HA82 394 aa18.21■□□□□ 0.5
RFTN1-201ENST00000334133 TM7SF3Q9NS93 570 aa18.21■□□□□ 0.5
RFTN1-201ENST00000334133 GALNT8Q9NY28 637 aa18.21■□□□□ 0.5
RFTN1-201ENST00000334133 NINQ8N4C6 2090 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 J3QRK9 145 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 KLK1P06870 262 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 HTR1BP28222 390 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 DGCR6Q14129 220 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 PRSS53Q2L4Q9 553 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 ZNF420Q8TAQ5 688 aaPredicted RBP18.2■□□□□ 0.5
RFTN1-201ENST00000334133 TBC1D15Q8TC07 691 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 COQ10AQ96MF6 247 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 DOK1Q99704 481 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 FUNDC2Q9BWH2 189 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 TMEM184CQ9NVA4 438 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 GPATCH2Q9NW75 528 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 THUMPD1Q9NXG2 353 aaKnown RBP18.2■□□□□ 0.5
RFTN1-201ENST00000334133 MAP4K5Q9Y4K4 846 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 SNX5Q9Y5X3 404 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 CXorf51AA0A1B0GTR3 108 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 NPIPB8E9PQR5 432 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 FUT4P22083 530 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 TTKP33981 857 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 RANBP1P43487 201 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 EPS8Q12929 822 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 B3GNT8Q7Z7M8 397 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 TM9SF3Q9HD45 589 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 RPS6KA6Q9UK32 745 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 GMPPBQ9Y5P6 360 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 CCDC88CQ9P219 2028 aa18.2■□□□□ 0.5
RFTN1-201ENST00000334133 PIPSLA2A3N6 862 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 GSTM2P28161 218 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 HPCAL1P37235 193 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 WASP42768 502 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 MLLT10P55197 1068 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 TAS2R50P59544 299 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 TAP2Q03519 686 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 C2orf80Q0P641 193 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 CBLL1Q75N03 491 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 PIWIL3Q7Z3Z3 882 aaKnown RBP18.19■□□□□ 0.5
RFTN1-201ENST00000334133 SYNPOQ8N3V7 929 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 TTC29Q8NA56 475 aaPredicted RBP18.19■□□□□ 0.5
RFTN1-201ENST00000334133 OR5AR1Q8NGP9 310 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 ZFP90Q8TF47 636 aa18.19■□□□□ 0.5
RFTN1-201ENST00000334133 ZNF707Q96C28 371 aaPredicted RBP18.19■□□□□ 0.5
RFTN1-201ENST00000334133 ASPSCR1Q9BZE9 553 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms