RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 PCDHB11Q9Y5F2 797 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 TRBV5-4A0A0C4DH59 114 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 SNX4O95219 450 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 OLR1P78380 273 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 HSPA14Q0VDF9 509 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 GPR17Q13304 367 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 DDX39BQ13838 428 aaKnown RBP22.79■■□□□ 1.24
TSKU-201ENST00000333090 LRRC26Q2I0M4 334 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 TSEN54Q7Z6J9 526 aaKnown RBP22.79■■□□□ 1.24
TSKU-201ENST00000333090 BHMTQ93088 406 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 OR5M11Q96RB7 305 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 RAD9AQ99638 391 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 DOHHQ9BU89 302 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 MS4A12Q9NXJ0 267 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 NDUFAF4Q9P032 175 aa22.79■■□□□ 1.24
TSKU-201ENST00000333090 AP3D1O14617 1153 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 MRPS15P82914 257 aaKnown RBP22.78■■□□□ 1.24
TSKU-201ENST00000333090 MRPL58Q14197 206 aaKnown RBP22.78■■□□□ 1.24
TSKU-201ENST00000333090 NRARPQ7Z6K4 114 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 NXPE1Q8N323 547 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 PIK3R3Q92569 461 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 WBP2Q969T9 261 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 PRM3Q9NNZ6 103 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 FAM120CQ9NX05 1096 aaKnown RBP22.78■■□□□ 1.24
TSKU-201ENST00000333090 SLC6A14Q9UN76 642 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 DUSP12Q9UNI6 340 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 PADI2Q9Y2J8 665 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 PCDHGA2Q9Y5H1 932 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 CA12O43570 354 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 CYP7B1O75881 506 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 PIK3CBP42338 1070 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 OR1E2P47887 323 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 LIMK1P53667 647 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 CASP9P55211 416 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 CDH12P55289 794 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 TSTQ16762 297 aaKnown RBP22.78■■□□□ 1.24
TSKU-201ENST00000333090 ADGRF1Q5T601 910 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 HOMEZQ8IX15 550 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 B3GNT7Q8NFL0 401 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 SLC30A2Q9BRI3 323 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 TSEN34Q9BSV6 310 aaKnown RBP22.78■■□□□ 1.24
TSKU-201ENST00000333090 CFL2Q9Y281 166 aa22.78■■□□□ 1.24
TSKU-201ENST00000333090 A8MV72 311 aaPredicted RBP22.77■■□□□ 1.24
TSKU-201ENST00000333090 ADAMDEC1O15204 470 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 DPM1O60762 260 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 HIST1H2AGP0C0S8 130 aaPredicted RBP22.77■■□□□ 1.24
TSKU-201ENST00000333090 POU2F1P14859 743 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 HIST1H2ADP20671 130 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 AOAHP28039 575 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 HNF1BP35680 557 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 ANGPTL8Q6UXH0 198 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 HIST1H2AHQ96KK5 128 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 HIST1H2AJQ99878 128 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 H2AFJQ9BTM1 129 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 ATG10Q9H0Y0 220 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 KLK4Q9Y5K2 254 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 FAM172BPA6NC97 362 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 H3BQ06 376 aaPredicted RBP22.77■■□□□ 1.24
TSKU-201ENST00000333090 GUCY1B2O75343 617 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 SH3BGRLO75368 114 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 TRBC1P01850 177 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 CCR7P32248 378 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 ETV6P41212 452 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 SPIBQ01892 262 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 CHIT1Q13231 466 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 ANKS3Q6ZW76 656 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 L3MBTL4Q8NA19 623 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 OR8J2Q8NGG1 315 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 CDK5RAP1Q96SZ6 601 aaKnown RBP22.77■■□□□ 1.24
TSKU-201ENST00000333090 MTERF1Q99551 399 aaKnown RBP22.77■■□□□ 1.24
TSKU-201ENST00000333090 TBC1D24Q9ULP9 559 aa22.77■■□□□ 1.24
TSKU-201ENST00000333090 TMEM229AB2RXF0 380 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 PLK4O00444 970 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 RGS5O15539 181 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 PRKCZQ05513 592 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 UBQLNLQ8IYU4 475 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 LGI4Q8N135 537 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 DEPDC4Q8N2C3 294 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 CPA6Q8N4T0 437 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 SOCS4Q8WXH5 440 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 MGLLQ99685 303 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 DUSP26Q9BV47 211 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 BBS2Q9BXC9 721 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 CCDC177Q9NQR7 707 aaPredicted RBP22.76■■□□□ 1.23
TSKU-201ENST00000333090 NDUFB5O43674 189 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 GABRB1P18505 474 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 HECTD3Q5T447 861 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 LYPLAL1Q5VWZ2 237 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 RGMBQ6NW40 437 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 TMC5Q6UXY8 1006 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 DENND6BQ8NEG7 585 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 OR9Q2Q8NGE9 314 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 DMRTB1Q96MA1 342 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 NEDD4LQ96PU5 975 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 COPS8Q99627 209 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 POFUT2Q9Y2G5 429 aa22.76■■□□□ 1.23
TSKU-201ENST00000333090 HOXC11O43248 304 aaPredicted RBP22.75■■□□□ 1.23
TSKU-201ENST00000333090 ADAMTS4O75173 837 aa22.75■■□□□ 1.23
TSKU-201ENST00000333090 RPLP2P05387 115 aaKnown RBP22.75■■□□□ 1.23
TSKU-201ENST00000333090 SPAM1P38567 509 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms