RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 BTNL2Q9UIR0 455 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 HCN2Q9UL51 889 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 TPP2P29144 1249 aaPredicted RBP16.74■□□□□ 0.27
DDX28-201ENST00000332395 SHMT2P34897 504 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 CDK9P50750 372 aaKnown RBP16.74■□□□□ 0.27
DDX28-201ENST00000332395 EPS8Q12929 822 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 TMED1Q13445 227 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 PIP5KL1Q5T9C9 394 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 ANXA8L1Q5VT79 327 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 UNC5DQ6UXZ4 953 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 ZNF554Q86TJ5 538 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 ZDHHC21Q8IVQ6 265 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 CPA6Q8N4T0 437 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 SNX19Q92543 992 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 COQ8BQ96D53 544 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 COX14Q96I36 57 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 DPH2Q9BQC3 489 aaPredicted RBP16.74■□□□□ 0.27
DDX28-201ENST00000332395 ASF1AQ9Y294 204 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 KIF26AQ9ULI4 1882 aaPredicted RBP16.74■□□□□ 0.27
DDX28-201ENST00000332395 COQ9O75208 318 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 GJA4P35212 333 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 MEF2AQ02078 507 aaPredicted RBP16.74■□□□□ 0.27
DDX28-201ENST00000332395 SFSWAPQ12872 951 aaKnown RBP16.74■□□□□ 0.27
DDX28-201ENST00000332395 HIST2H2ACQ16777 129 aaPredicted RBP16.74■□□□□ 0.27
DDX28-201ENST00000332395 ANKRD34AQ69YU3 496 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 HIST2H2AA3Q6FI13 130 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 NXPE4Q6UWF7 544 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 ADAMTSL4Q6UY14 1074 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 ARMCX6Q7L4S7 300 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 LPCAT2Q7L5N7 544 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 MBOAT4Q96T53 435 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 SPNS1Q9H2V7 528 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 FAM118AQ9NWS6 357 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 SH3BP4Q9P0V3 963 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 U3KQV3 271 aa16.74■□□□□ 0.27
DDX28-201ENST00000332395 C1orf226A1L170 272 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 TGFB1P01137 390 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 ELK4P28324 431 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 KDELR2P33947 212 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 YAP1P46937 504 aaKnown RBP16.73■□□□□ 0.27
DDX28-201ENST00000332395 ESRRGP62508 458 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 ZNF763Q0D2J5 394 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 RUNX3Q13761 415 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 TTC23Q5W5X9 447 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 EGFLAMQ63HQ2 1017 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 KLHL35Q6PF15 583 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 COMMD6Q7Z4G1 85 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 GPR141Q7Z602 305 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 GALNT10Q86SR1 603 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 PDZD3Q86UT5 571 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 HEATR4Q86WZ0 1026 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 CACUL1Q86Y37 369 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 CHPFQ8IZ52 775 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 FNDC8Q8TC99 324 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 CXorf40BQ96DE9 158 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 IL17FQ96PD4 163 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 ING2Q9H160 280 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 SIRT5Q9NXA8 310 aa16.73■□□□□ 0.27
DDX28-201ENST00000332395 EXO1Q9UQ84 846 aaKnown RBP16.73■□□□□ 0.27
DDX28-201ENST00000332395 KAT7O95251 611 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 PCCBP05166 539 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 PRKACGP22612 351 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 C16orf72Q14CZ0 275 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 C9orf50Q5SZB4 431 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 PNCKQ6P2M8 343 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 DHRS4L2Q6PKH6 230 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 THAP5Q7Z6K1 395 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 AMZ2Q86W34 360 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 OR5AR1Q8NGP9 310 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 RAD51AP1Q96B01 352 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 NPLQ9BXD5 320 aaPredicted RBP16.72■□□□□ 0.27
DDX28-201ENST00000332395 AMBRA1Q9C0C7 1298 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 OR51B5Q9H339 312 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 IL1RAPQ9NPH3 570 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 IFT80Q9P2H3 777 aaPredicted RBP16.72■□□□□ 0.27
DDX28-201ENST00000332395 RPS6KA6Q9UK32 745 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 FZD4Q9ULV1 537 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 PLAGL1Q9UM63 463 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 SAP18O00422 153 aaKnown RBP16.72■□□□□ 0.27
DDX28-201ENST00000332395 RNASET2O00584 256 aaKnown RBP16.72■□□□□ 0.27
DDX28-201ENST00000332395 PI15O43692 258 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 HS6ST1O60243 411 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 GBAP04062 536 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 PIGAP37287 484 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 HLCSP50747 726 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 FCHO2Q0JRZ9 810 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 GAB1Q13480 694 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 ZBED5Q49AG3 693 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 ZNF385BQ569K4 471 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 PRAMEF14Q5SWL7 426 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 PRAMEF13Q5VWM6 474 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 FAM46CQ5VWP2 391 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 HIPK1Q86Z02 1210 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 C8orf59Q8N0T1 100 aaPredicted RBP16.72■□□□□ 0.27
DDX28-201ENST00000332395 SYNPOQ8N3V7 929 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 ZNF555Q8NEP9 628 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.72■□□□□ 0.27
DDX28-201ENST00000332395 REEP4Q9H6H4 257 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 LTB4R2Q9NPC1 389 aa16.72■□□□□ 0.27
DDX28-201ENST00000332395 VNN3Q9NY84 501 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms