RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 WDR36Q8NI36 951 aaKnown RBP12.34□□□□□ -0.43
CCDC60-201ENST00000327554 TESCQ96BS2 214 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 CCDC120Q96HB5 630 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 NIPSNAP1Q9BPW8 284 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 ACPTQ9BZG2 426 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 GLTPQ9NZD2 209 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 CNOT2Q9NZN8 540 aaKnown RBP12.34□□□□□ -0.43
CCDC60-201ENST00000327554 TRPS1Q9UHF7 1281 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 FKBPLQ9UIM3 349 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 LSM2Q9Y333 95 aaKnown RBP12.34□□□□□ -0.43
CCDC60-201ENST00000327554 HCN4Q9Y3Q4 1203 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 HSPB11Q9Y547 144 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 COMMD10Q9Y6G5 202 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 TRIP12Q14669 1992 aaPredicted RBP12.34□□□□□ -0.43
CCDC60-201ENST00000327554 MEIS3P2A8K0S8 358 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 CYP17A1P05093 508 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 PCSK1P29120 753 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 MC4RP32245 332 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 SOX3P41225 446 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 TAF1AQ15573 450 aaPredicted RBP12.34□□□□□ -0.43
CCDC60-201ENST00000327554 MS4A13Q5J8X5 152 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 PLAG1Q6DJT9 500 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 GLCCI1Q86VQ1 547 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 FAM217AQ8IXS0 508 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 CAMKK1Q8N5S9 505 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 ENKURQ8TC29 256 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 IGSF8Q969P0 613 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 MTFMTQ96DP5 389 aaKnown RBP12.34□□□□□ -0.43
CCDC60-201ENST00000327554 MCOLN1Q9GZU1 580 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 ABHD16BQ9H3Z7 469 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 IMPAD1Q9NX62 359 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 RBPJLQ9UBG7 517 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 POFUT2Q9Y2G5 429 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 PADI2Q9Y2J8 665 aa12.34□□□□□ -0.43
CCDC60-201ENST00000327554 ARIH1Q9Y4X5 557 aaPredicted RBP12.34□□□□□ -0.43
CCDC60-201ENST00000327554 KDM4FA0A1W2PPD8 638 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 MOXD2PA6NHM9 499 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 LOC730098B7Z3J9 87 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 TNFRSF11BO00300 401 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 PDPK1O15530 556 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 DDX5P17844 614 aaKnown RBP12.33□□□□□ -0.44
CCDC60-201ENST00000327554 ADCYAP1R1P41586 468 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 AFF1P51825 1210 aaKnown RBP12.33□□□□□ -0.44
CCDC60-201ENST00000327554 MAPK12P53778 367 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 RUNX1T1Q06455 604 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 ZNF235Q14590 738 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 GDPGP1Q6ZNW5 385 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 OR4C15Q8NGM1 316 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 NELL1Q92832 810 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 ULK4Q96C45 1275 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 C17orf62Q9BQA9 187 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 DHRS7Q9Y394 339 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 AUP1Q9Y679 476 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 CHD5Q8TDI0 1954 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 IGLV3-10A0A075B6K4 115 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.33□□□□□ -0.44
CCDC60-201ENST00000327554 LINC00862A6NCI5 91 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 FABP12A6NFH5 140 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 SCAMP3O14828 347 aaKnown RBP12.33□□□□□ -0.44
CCDC60-201ENST00000327554 LRATO95237 230 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 PDGFAP04085 211 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 SDC1P18827 310 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 RPS12P25398 132 aaKnown RBP12.33□□□□□ -0.44
CCDC60-201ENST00000327554 ITGB7P26010 798 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 PTGS2P35354 604 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 CDC42EP1Q00587 391 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 VGLL4Q14135 290 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 PDZK1Q5T2W1 519 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 CIR1Q86X95 450 aaPredicted RBP12.33□□□□□ -0.44
CCDC60-201ENST00000327554 SYNPOQ8N3V7 929 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 MSLNLQ96KJ4 702 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 SERPINB11Q96P15 392 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 PKMYT1Q99640 499 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 NTMT1Q9BV86 223 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 C12orf4Q9NQ89 552 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 POLHQ9Y253 713 aa12.33□□□□□ -0.44
CCDC60-201ENST00000327554 A0A1W2PQH9 124 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 SNTNA6NMZ2 147 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 GPR39O43194 453 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 PRAMEF11O60813 436 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 RAMP2O60895 175 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 EBLN1P0CF75 366 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 RHAGQ02094 409 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 VEZF1Q14119 521 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 DUOXA1Q1HG43 343 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 ZRANB3Q5FWF4 1079 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 ALG1LQ6GMV1 187 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 PLET1Q6UQ28 207 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 LRRTM3Q86VH5 581 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 LPCAT1Q8NF37 534 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 CREB3L4Q8TEY5 395 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 TMEM80Q96HE8 168 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 CD244Q9BZW8 370 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 P2RY12Q9H244 342 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 ABI2Q9NYB9 513 aaPredicted RBP12.32□□□□□ -0.44
CCDC60-201ENST00000327554 NDUFAF4Q9P032 175 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 SEC14L4Q9UDX3 406 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 MAPRE3Q9UPY8 281 aa12.32□□□□□ -0.44
CCDC60-201ENST00000327554 TLR6Q9Y2C9 796 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms