RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 PTX3P26022 381 aaPredicted RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 RPL38P63173 70 aaKnown RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CYP4F2P78329 520 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 EMX2Q04743 252 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CYP4F3Q08477 520 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 AMZ1Q400G9 498 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 FAM91A1Q658Y4 838 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 C6orf89Q6UWU4 347 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CLNKQ7Z7G1 428 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CPSF7Q8N684 471 aaKnown RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 FNDC5Q8NAU1 212 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 TRPV3Q8NET8 790 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 IFI44Q8TCB0 444 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CREB3L4Q8TEY5 395 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 ERP27Q96DN0 273 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CNDP2Q96KP4 475 aaKnown RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 ZFYVE21Q9BQ24 234 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CCDC3Q9BQI4 270 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 KLHL25Q9H0H3 589 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 PRM3Q9NNZ6 103 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 PARD6AQ9NPB6 346 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 MRGBPQ9NV56 204 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 AIG1Q9NVV5 245 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 TMED5Q9Y3A6 229 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 COPG1Q9Y678 874 aaKnown RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 RP1P56715 2156 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 EBAG9O00559 213 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 SEMA3DO95025 777 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 LDOC1O95751 146 aaPredicted RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 TBX6O95947 436 aaPredicted RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CD59P13987 128 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CFHR1Q03591 330 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 TBL3Q12788 808 aaKnown RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CUL3Q13618 768 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 UBAP2LQ14157 1087 aaKnown RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 SQLEQ14534 574 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CLPPQ16740 277 aaPredicted RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 GSTA3Q16772 222 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 KHDRBS2Q5VWX1 349 aaKnown RBP9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 PRSS42Q7Z5A4 293 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 FITM2Q8N6M3 262 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 MARK4Q96L34 752 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 FCRL1Q96LA6 429 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 CHRNA10Q9GZZ6 450 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 SEMA5BQ9P283 1151 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 FTSJ1Q9UET6 329 aa9.8□□□□□ -0.84
VIPAS39-201ENST00000327028 SLC9B1P1A6NJY1 282 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 CCT8L1PA6NM43 557 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 SLC22A2O15244 555 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 KIF1CO43896 1103 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 FOXD2O60548 495 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 SEC22BO75396 215 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 TGFB1P01137 390 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 RPLP0P05388 317 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 IDO1P14902 403 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 CKMT2P17540 419 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 MRPL19P49406 292 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 KIAA0040Q15053 153 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 SPIN4Q56A73 249 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 FBXO42Q6P3S6 717 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 FOXR1Q6PIV2 292 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 PRR23CQ6ZRP0 262 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 VN1R4Q7Z5H5 301 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 NAXDQ8IW45 347 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 PARP9Q8IXQ6 854 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 NT5CQ8TCD5 201 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 CHTF18Q8WVB6 975 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 TCTN2Q96GX1 697 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 APIPQ96GX9 242 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 OR2A5Q96R48 311 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 DPYSL5Q9BPU6 564 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 C1orf50Q9BV19 199 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 CCDC106Q9BWC9 280 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 OR51B5Q9H339 312 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 SYNPO2LQ9H987 977 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 RXFP3Q9NSD7 469 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 NOP53Q9NZM5 478 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 G3BP2Q9UN86 482 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 POLR3HQ9Y535 204 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 DMDP11532 3685 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 NDUFS4O43181 175 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 PRAMEF10O60809 474 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 ACP1P24666 158 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 MAPK1P28482 360 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 STX1BP61266 288 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 CCL7P80098 99 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 ACSM2AQ08AH3 577 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 AASDHQ4L235 1098 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 RFTN2Q52LD8 501 aaPredicted RBP9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 TMEM35AQ53FP2 167 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 DEPDC1Q5TB30 811 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 ACSM2BQ68CK6 577 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 ASPGQ86U10 573 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 RHBDD1Q8TEB9 315 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 NUDT22Q9BRQ3 303 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 MRPL1Q9BYD6 325 aaKnown RBP9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 BRINP2Q9C0B6 783 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 LRRN3Q9H3W5 708 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 SIRT5Q9NXA8 310 aa9.79□□□□□ -0.84
VIPAS39-201ENST00000327028 ARMCX1Q9P291 453 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms