RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 GATMP50440 423 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 TAS2R50P59544 299 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 KCNC3Q14003 757 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 SELPLGQ14242 412 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 C5orf22Q49AR2 442 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 PGBD5Q8N414 524 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 SLCO4A1Q96BD0 722 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 SMIM14Q96QK8 99 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 INPP5KQ9BT40 448 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 SLC22A4Q9H015 551 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 OR2AG1Q9H205 316 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 TRIT1Q9H3H1 467 aaKnown RBP14.26□□□□□ -0.13
TCOF1-201ENST00000323668 TUBB1Q9H4B7 451 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 THG1LQ9NWX6 298 aaKnown RBP14.26□□□□□ -0.13
TCOF1-201ENST00000323668 INTS6Q9UL03 887 aaKnown RBP14.26□□□□□ -0.13
TCOF1-201ENST00000323668 ZNF30P17039 623 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 BPIP17213 487 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 CSTF2P33240 577 aaKnown RBP eCLIP14.26□□□□□ -0.13
TCOF1-201ENST00000323668 ZNF763Q0D2J5 394 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 SLC13A2Q13183 592 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 IRAK1BP1Q5VVH5 260 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 C22orf39Q6P5X5 142 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 CEACAM20Q6UY09 585 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 Q6ZSR9 355 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 Q6ZVL8 140 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 OR13F1Q8NGS4 319 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 CCM2Q9BSQ5 444 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 IL26Q9NPH9 171 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 CTPS2Q9NRF8 586 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 IMP3Q9NV31 184 aaKnown RBP14.26□□□□□ -0.13
TCOF1-201ENST00000323668 COMMD3Q9UBI1 195 aa14.26□□□□□ -0.13
TCOF1-201ENST00000323668 A0A1W2PRU2 124 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 CCRL2O00421 344 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 HPGDP15428 266 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 RGS8P57771 180 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 FAM189BP81408 668 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 MTAPQ13126 283 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 ZNF181Q2M3W8 571 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 PROX2Q3B8N5 592 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 RTP2Q5QGT7 225 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 CXXC5Q7LFL8 322 aaKnown RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 FLCNQ8NFG4 579 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 SH3RF2Q8TEC5 729 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 DUS3LQ96G46 650 aaKnown RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 ZCCHC3Q9NUD5 404 aaKnown RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 OSER1Q9NX31 292 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 OR1F1O43749 312 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 STSP08842 583 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 MTHFD2P13995 350 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 BDKRB1P46663 353 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 CENPAP49450 140 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 TMEM203Q969S6 136 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 SCLYQ96I15 445 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 ZNF514Q96K75 400 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 ZNF583Q96ND8 569 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 UHRF1Q96T88 793 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 YIPF2Q9BWQ6 316 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 KRBA1A5PL33 1030 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 MUSKO15146 869 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 ARHGEF15O94989 841 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 RPS3P23396 243 aaKnown RBP eCLIP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 GTF2E2P29084 291 aaKnown RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 KCNC4Q03721 635 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 EMX1Q04741 257 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 PPIGQ13427 754 aaKnown RBP eCLIP14.25□□□□□ -0.132e-7■■□□□ 13.8
TCOF1-201ENST00000323668 ZNF517Q6ZMY9 492 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 MSANTD1Q6ZTZ1 278 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 TICAM1Q8IUC6 712 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 GJD3Q8N144 294 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 FAM46DQ8NEK8 389 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 UFD1Q92890 307 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 SCAMP4Q969E2 229 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 KCTD7Q96MP8 289 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 CCDC3Q9BQI4 270 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 RHBGQ9H310 441 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 REEP4Q9H6H4 257 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 TMEM30AQ9NV96 361 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 DUS2Q9NX74 493 aaKnown RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 ZNF222Q9UK12 451 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 ISM1B1AKI9 464 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 CCL16O15467 120 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 C8AP07357 584 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 CD247P20963 164 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 CCND3P30281 292 aaPredicted RBP14.25□□□□□ -0.13
TCOF1-201ENST00000323668 RYKP34925 604 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 RBBP4Q09028 425 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 ARSIQ5FYB1 569 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 MORN1Q5T089 497 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 SLC35G5Q96KT7 338 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 ART5Q96L15 291 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 MGLLQ99685 303 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 TBC1D17Q9HA65 648 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 B3GNT3Q9Y2A9 372 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 PCDHGB5Q9Y5G0 923 aa14.25□□□□□ -0.13
TCOF1-201ENST00000323668 PHIPQ8WWQ0 1821 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 SLC16A5O15375 505 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 LCKP06239 509 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 BCHEP06276 602 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 ANKDD1AQ495B1 522 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 Q6ZNX1 250 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms