RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 STRCP1A6NGW2 1772 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PAK4O96013 591 aaPredicted RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PRPS1L1P21108 318 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RPL4P36578 427 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SPCS2Q15005 226 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PON3Q15166 354 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 STEAP4Q687X5 459 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 TCEAL6Q6IPX3 200 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 KCTD20Q7Z5Y7 419 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 AKT1S1Q96B36 256 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 SLC6A17Q9H1V8 727 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 GMEB2Q9UKD1 530 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RGS13O14921 159 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 PDHA2P29803 388 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RGS1Q08116 209 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 RAPSNQ13702 412 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 GANABQ14697 944 aaKnown RBP6.86□□□□□ -1.31
SMC1A-201ENST00000322213 GPR19Q15760 415 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 MEDAGQ5VYS4 303 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 NPLOC4Q8TAT6 608 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 C17orf62Q9BQA9 187 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 ASB8Q9H765 288 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 MAP10Q9P2G4 905 aa6.86□□□□□ -1.31
SMC1A-201ENST00000322213 TOXO94900 526 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 S100PP25815 95 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 MC4RP32245 332 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 NKAPLQ5M9Q1 402 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SLC36A4Q6YBV0 504 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 RNF44Q7L0R7 432 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 C2CD4AQ8NCU7 369 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 KCNN1Q92952 543 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SCGB3A2Q96PL1 93 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 TSSK3Q96PN8 268 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 AARSD1Q9BTE6 412 aaKnown RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 OR51B5Q9H339 312 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ITM2CQ9NQX7 267 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 UFSP2Q9NUQ7 469 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 TAS2R10Q9NYW0 307 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 GABRDO14764 452 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SLC7A4O43246 635 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 OIP5O43482 229 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 RECQL4O94761 1208 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 FARS2O95363 451 aaKnown RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 IGSF6O95976 241 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CLUP10909 449 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 MAPK3P27361 379 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SERPINA4P29622 427 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 BACE1P56817 501 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 UFM1P61960 85 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 DUOXA1Q1HG43 343 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 EIPR1Q53HC9 387 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF438Q7Z4V0 828 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ACBD4Q8NC06 268 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 OR5B17Q8NGF7 314 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ARL11Q969Q4 196 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 DENND4CQ5VZ89 1909 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SH3BGRLO75368 114 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 PAGE1O75459 146 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 VNN2O95498 520 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 IFNA17P01571 189 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 RB1P06400 928 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 RETP07949 1114 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CPOXP36551 454 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 TNFSF9P41273 254 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 NUDT6P53370 316 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CXCR4P61073 352 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CDC20Q12834 499 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SCARB2Q14108 478 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 XKR4Q5GH76 650 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 GLB1LQ6UWU2 654 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ZSWIM9Q86XI8 627 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 LACC1Q8IV20 430 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 TMEM74Q96NL1 305 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 C12orf57Q99622 126 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ARL6Q9H0F7 186 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 MROH8Q9H579 483 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 MARCH2Q9P0N8 246 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 KCNIP3Q9Y2W7 256 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 GXYLT2A0PJZ3 443 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 NFKB2Q00653 900 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SLC3A1Q07837 685 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ZNF366Q8N895 744 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CAMK1GQ96NX5 476 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SLC35A5Q9BS91 424 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CLCA3PQ9Y6N3 262 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 MN1Q10571 1320 aaPredicted RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 PRAMEF2O60811 474 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 RGS19P49795 217 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 NAE1Q13564 534 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 INTS5Q6P9B9 1019 aaKnown RBP6.85□□□□□ -1.31
SMC1A-201ENST00000322213 SYNPOQ8N3V7 929 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ZBTB2Q8N680 514 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 LRRC52Q8N7C0 313 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 ERVK-18Q9QC07 812 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 DAPL1A0PJW8 107 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 CLIC1O00299 241 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 B4GAT1O43505 415 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 JRKO75564 520 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 HMGN1P05114 100 aa6.85□□□□□ -1.31
SMC1A-201ENST00000322213 OXTRP30559 389 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms