RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 ERVH48-1M5A8F1 160 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 PRAMEF1O95521 474 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 COX7A2P14406 83 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 CDH12P55289 794 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 P2RX3P56373 397 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 ASB15Q8WXK1 588 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 MED30Q96HR3 178 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 PRRG3Q9BZD7 231 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 TPT1P8Q9HAU6 139 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 ASAH2Q9NR71 780 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 SNTG1Q9NSN8 517 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 ARL15Q9NXU5 204 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 IL17CQ9P0M4 197 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 PCDHB9Q9Y5E1 797 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 KDELR3O43731 214 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 GABRB1P18505 474 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 TYMPP19971 482 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 SLC6A4P31645 630 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 SPIBQ01892 262 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 ABRQ12979 859 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 SSX1Q16384 188 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 SIGIRRQ6IA17 410 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 NOXRED1Q6NXP6 359 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 CERS6Q6ZMG9 384 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 RNF130Q86XS8 419 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 ATAD1Q8NBU5 361 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 C9orf43Q8TAL5 461 aaPredicted RBP17.26■□□□□ 0.35
PRKCB-202ENST00000321728 GTF3C2Q8WUA4 911 aaPredicted RBP17.26■□□□□ 0.35
PRKCB-202ENST00000321728 CMTM7Q96FZ5 175 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 SPATA17Q96L03 361 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 SGIP1Q9BQI5 828 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 ASB8Q9H765 288 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 CCSER2Q9H7U1 834 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 FZD4Q9ULV1 537 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 POFUT2Q9Y2G5 429 aa17.26■□□□□ 0.35
PRKCB-202ENST00000321728 ADAMDEC1O15204 470 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 CPNE3O75131 537 aaKnown RBP17.25■□□□□ 0.35
PRKCB-202ENST00000321728 OPN1SWP03999 348 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 ABCB1P08183 1280 aaPredicted RBP17.25■□□□□ 0.35
PRKCB-202ENST00000321728 ADRA2AP08913 450 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 HTR2BP41595 481 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 CPT1AP50416 773 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 CRYBA2P53672 197 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 GPLD1P80108 840 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 SCN1BQ07699 218 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 VEZF1Q14119 521 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 ZNF79Q15937 498 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 LDLRAD1Q5T700 205 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 C9orf131Q5VYM1 1079 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 ERAP2Q6P179 960 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 LINGO4Q6UY18 593 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 TRIM48Q8IWZ4 208 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 RBFAQ8N0V3 343 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 LGI4Q8N135 537 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 RNF175Q8N4F7 328 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 UBTD2Q8WUN7 234 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 EID2BQ96D98 161 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 GDF15Q99988 308 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 DOHHQ9BU89 302 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 BARHL1Q9BZE3 327 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 NDUFAF4Q9P032 175 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 PRG3Q9Y2Y8 225 aaPredicted RBP17.25■□□□□ 0.35
PRKCB-202ENST00000321728 ICMTO60725 284 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 ANXA5P08758 320 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 SLC10A3P09131 477 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 ALPIP09923 528 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 TRAPPC2P0DI81 140 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 TRAPPC2BP0DI82 140 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 EPORP19235 508 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 PRPS1L1P21108 318 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 RPS5P46782 204 aaKnown RBP17.25■□□□□ 0.35
PRKCB-202ENST00000321728 OR1E2P47887 323 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 RUNX1T1Q06455 604 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 DSC3Q14574 896 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 UGT8Q16880 541 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 TOR1AIP1Q5JTV8 583 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 MSANTD1Q6ZTZ1 278 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 FAM217AQ8IXS0 508 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 UBE2J2Q8N2K1 259 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 SYNPOQ8N3V7 929 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 COQ8BQ96D53 544 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 SLC22A4Q9H015 551 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 ZNF556Q9HAH1 456 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 SNX7Q9UNH6 387 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 PADI2Q9Y2J8 665 aa17.25■□□□□ 0.35
PRKCB-202ENST00000321728 DPM1O60762 260 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 ARHGEF15O94989 841 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 IGLV3-27P01718 113 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 ANXA8P13928 327 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 THPOP40225 353 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 TGM4P49221 684 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 PURAQ00577 322 aaKnown RBP17.24■□□□□ 0.35
PRKCB-202ENST00000321728 MRPL10Q7Z7H8 261 aaKnown RBP17.24■□□□□ 0.35
PRKCB-202ENST00000321728 OR9Q2Q8NGE9 314 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 SLC32A1Q9H598 525 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 OR6C70A6NIJ9 312 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 F11P03951 625 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 CSF2P04141 144 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 SOX3P41225 446 aa17.24■□□□□ 0.35
PRKCB-202ENST00000321728 PXNP49023 591 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms