RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ACVR1Q04771 509 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 TBRG1Q3YBR2 411 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 MPPE1Q53F39 396 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 LINC00299Q6ZSB3 139 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 DEFB128Q7Z7B8 93 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 PHYKPLQ8IUZ5 450 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 RIMKLAQ8IXN7 391 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 SIX5Q8N196 739 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 CACTIN-AS1Q8N1I8 211 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 OR4K1Q8NGD4 311 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 XAGE5Q8WWM1 108 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 RASSF5Q8WWW0 418 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 FATE1Q969F0 183 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 APIPQ96GX9 242 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF486Q96H40 463 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 SPATA5L1Q9BVQ7 753 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 CFAP97Q9P2B7 532 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 CLCA2Q9UQC9 943 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 SPIN1Q9Y657 262 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 COL11A2P13942 1736 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 THSD7AQ9UPZ6 1657 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 A0A1W2PRB8 838 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 NOTOA8MTQ0 251 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 SAP18O00422 153 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 ADAM23O75077 832 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 C21orf33P30042 268 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 BUD31P41223 144 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 RAB25P57735 213 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 FCHO2Q0JRZ9 810 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 ANKRD34AQ69YU3 496 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 TNFAIP8L2Q6P589 184 aaPredicted RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 THOC6Q86W42 341 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 LRRC17Q8N6Y2 441 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 VMP1Q96GC9 406 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 GFM1Q96RP9 751 aaKnown RBP12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 FAM129BQ96TA1 746 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 COMMD3Q9UBI1 195 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 MALT1Q9UDY8 824 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 MCM3APO60318 1980 aa12.33□□□□□ -0.44
DNMT3A-202ENST00000321117 SOBPA7XYQ1 873 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 PRKAR2AP13861 404 aaKnown RBP12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 SDC1P18827 310 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 PGFP49763 221 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 SRP54P61011 504 aaKnown RBP12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 TARDBPQ13148 414 aaKnown RBP eCLIP12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 AQP6Q13520 282 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 C5orf22Q49AR2 442 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 CYP27C1Q4G0S4 372 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 SPIN4Q56A73 249 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 SLC5A8Q8N695 610 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 CPPED1Q9BRF8 314 aaPredicted RBP12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 ACPTQ9BZG2 426 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 KRCC1Q9NPI7 259 aaPredicted RBP12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 DNAJC27Q9NZQ0 273 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 POU2F3Q9UKI9 436 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 OR6C70A6NIJ9 312 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 CLDN24A6NM45 220 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 SEPT4O43236 478 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 JRKO75564 520 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 GABRR2P28476 465 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 GJA5P36382 358 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 XKP51811 444 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 EXOC3L2Q2M3D2 409 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 TPRG1Q6ZUI0 275 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 DCAF4L2Q8NA75 395 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 TADA1Q96BN2 335 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 PAWRQ96IZ0 340 aaKnown RBP12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 MBOAT4Q96T53 435 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 TMEM246Q9BRR3 403 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 OR51E2Q9H255 320 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 RETREG1Q9H6L5 497 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 NTN4Q9HB63 628 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 ZNF232Q9UNY5 417 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 TNFRSF10BO14763 440 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 CDRT1O95170 752 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 HNF1BP35680 557 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 PNLIPRP1P54315 467 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 LRRC66Q68CR7 880 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 NCEH1Q6PIU2 408 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 MSANTD1Q6ZTZ1 278 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 RBM23Q86U06 439 aaKnown RBP12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 TRIM48Q8IWZ4 208 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 PDLIM5Q96HC4 596 aaKnown RBP12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 EGLN2Q96KS0 407 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 NTMT1Q9BV86 223 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 SMURF1Q9HCE7 757 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 TRPV5Q9NQA5 729 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 RHCGQ9UBD6 479 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 ING4Q9UNL4 249 aa12.32□□□□□ -0.44
DNMT3A-202ENST00000321117 IRGMA1A4Y4 181 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 FAM172BPA6NC97 362 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 TMEM221A6NGB7 291 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 COCHO43405 550 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SOX14O95416 240 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 HOXD9P28356 352 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 DAPP51397 102 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 PTSQ03393 145 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SYT6Q5T7P8 510 aaPredicted RBP12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SUSD1Q6UWL2 747 aa12.31□□□□□ -0.44
DNMT3A-202ENST00000321117 SERPINA11Q86U17 422 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms