RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 OR56A1Q8NGH5 318 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 TRBC2A0A5B9 178 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 SLC15A5A6NIM6 579 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 SMAD9O15198 467 aaKnown RBP16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 FLRT2O43155 660 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 TLX2O43763 284 aaPredicted RBP16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 THEGLP0DJG4 465 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 NEIL3Q8TAT5 605 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 PMEPA1Q969W9 287 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 SLC38A3Q99624 504 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 EPHX1P07099 455 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 SMARCD2Q92925 531 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 DGAT2Q96PD7 388 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 SLC29A3Q9BZD2 475 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 GRHPRQ9UBQ7 328 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 HYKKA2RU49 373 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 C9IYK1 514 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 PROM1O43490 865 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 GJA9P57773 515 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 VTCN1Q7Z7D3 282 aa16.4■□□□□ 0.22
SMCHD1-201ENST00000320876 RASAL1O95294 804 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 C7P10643 843 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 TMEM69Q5SWH9 247 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF584Q8IVC4 421 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 VNN3Q9NY84 501 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 NDUFAF4Q9P032 175 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 CLCA3PQ9Y6N3 262 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 TMEM150CB9EJG8 249 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 CHRFAM7AQ494W8 412 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 MEDAGQ5VYS4 303 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 FRG2Q64ET8 278 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 KCT2Q8NC54 265 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 PLEKHO2Q8TD55 490 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 FRG2BQ96QU4 278 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 CREBL2O60519 120 aaPredicted RBP16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 LINGO4Q6UY18 593 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 CERKQ8TCT0 537 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 THEM6Q8WUY1 208 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 COL3A1P02461 1466 aaPredicted RBP16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 ECI2O75521 394 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 HTR2BP41595 481 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 VGLL4Q14135 290 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 NFKBIDQ8NI38 313 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 FNDC8Q8TC99 324 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 UTS2RQ9UKP6 389 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 RHPN2P1A8MT19 583 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 H0YGN5 161 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 GRID2O43424 1007 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 HNRNPDQ14103 355 aaKnown RBP16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 DPYSL2Q16555 572 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 PIGGQ5H8A4 983 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 C9orf131Q5VYM1 1079 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 POC1BQ8TC44 478 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF675Q8TD23 568 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 KLHL15Q96M94 604 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 CDK15Q96Q40 435 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 MAGED1Q9Y5V3 778 aaPredicted RBP16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 TTC3P53804 2025 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 SYN3O14994 580 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 CREG1O75629 220 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 CHRM1P11229 460 aaPredicted RBP16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 GSCP56915 257 aaPredicted RBP16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 BORAQ6PGQ7 559 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF638Q14966 1978 aaKnown RBP16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 ERVK-21P61565 698 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 ALPK1Q96QP1 1244 aa16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 EVLQ9UI08 416 aaPredicted RBP16.39■□□□□ 0.21
SMCHD1-201ENST00000320876 LAMA4Q16363 1823 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 MYPNQ86TC9 1320 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 C3P01024 1663 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 SSX4O60224 188 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 MMP3P08254 477 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 MAGEA11P43364 429 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 NUDT6P53370 316 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 HSDL2Q6YN16 418 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 TSPAN33Q86UF1 283 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 KATNBL1Q9H079 304 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 SLC32A1Q9H598 525 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 C12orf71A8MTZ7 269 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 SULT4A1Q9BR01 284 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 NOX1Q9Y5S8 564 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 A8MV72 311 aaPredicted RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 CCL22O00626 93 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 OAZ2O95190 189 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 LATS1O95835 1130 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 ZNF16P17020 682 aaPredicted RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 RORAP35398 523 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 TMEM198Q66K66 360 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 RPL13AP3Q6NVV1 102 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 GPC2Q8N158 579 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 GIMAP5Q96F15 307 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 FAM120CQ9NX05 1096 aaKnown RBP16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 HIF3AQ9Y2N7 669 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 C1orf196B1AJZ1 125 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 GPR89AB7ZAQ6 455 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 FAM189A1O60320 539 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 GPR89BP0CG08 455 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 BCKDHAP12694 445 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 SLC29A4Q7RTT9 530 aa16.38■□□□□ 0.21
SMCHD1-201ENST00000320876 C12orf40Q86WS4 652 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms