RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 PRKD3O94806 890 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 RHOP08100 348 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 CD9P21926 228 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 CTNNB1P35222 781 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 GRIN2CQ14957 1233 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 ATAD3CQ5T2N8 411 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 CCDC149Q6ZUS6 474 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 NECAB2Q7Z6G3 386 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 FBLIM1Q8WUP2 373 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 SLC47A1Q96FL8 570 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 BCL7BQ9BQE9 202 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 FAM83DQ9H4H8 585 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 RNF167Q9H6Y7 350 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 VNN3Q9NY84 501 aa15.03■□□□□ -0
SHROOM1-201ENST00000319854 KRT6AP02538 564 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 KRT6BP04259 564 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 ATP1B2P14415 290 aaPredicted RBP15.02■□□□□ -0
SHROOM1-201ENST00000319854 EPCAMP16422 314 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 RYKP34925 604 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 IRS1P35568 1242 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 KRT6CP48668 564 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 PRMT2P55345 433 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 PWP1Q13610 501 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 ZNF181Q2M3W8 571 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 SOWAHCQ53LP3 525 aaPredicted RBP15.02■□□□□ -0
SHROOM1-201ENST00000319854 TCEAL5Q5H9L2 206 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 NXNL2Q5VZ03 156 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 FKBP9P1Q75LS8 142 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 PRSS48Q7RTY5 328 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 CYP4Z1Q86W10 505 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 FAM217AQ8IXS0 508 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 REXO5Q96IC2 774 aaKnown RBP15.02■□□□□ -0
SHROOM1-201ENST00000319854 SLC32A1Q9H598 525 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 ACOT13Q9NPJ3 140 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 C1orf109Q9NX04 203 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 FBXL12Q9NXK8 326 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 HS3ST2Q9Y278 367 aa15.02■□□□□ -0
SHROOM1-201ENST00000319854 ATG2BQ96BY7 2078 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 PRAMEF4O60810 478 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 DNTTP04053 509 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 HLA-EP13747 358 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 ALOX12P18054 663 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 EPHA2P29317 976 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 ST13P50502 369 aaKnown RBP15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 CYP4F3Q08477 520 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 CHIT1Q13231 466 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 SNAP47Q5SQN1 464 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 PRAMEF9Q5VWM5 478 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 SLX4IPQ5VYV7 408 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 CPXM2Q8N436 756 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 C2orf73Q8N5S3 287 aaPredicted RBP15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 PARP16Q8N5Y8 322 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 PROX1Q92786 737 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 DMRTB1Q96MA1 342 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 MYOCQ99972 504 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 ADPRHL2Q9NX46 363 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 C3orf18Q9UK00 162 aa15.02□□□□□ -0.01
SHROOM1-201ENST00000319854 FAM172BPA6NC97 362 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 AREL1O15033 823 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 KRT8P05787 483 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 DBTP11182 482 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 POLR2EP19388 210 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 MSH3P20585 1137 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 CDKN2CP42773 168 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 CTSCP53634 463 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 ZNF404Q494X3 552 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 PRSS36Q5K4E3 855 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 LILRA6Q6PI73 481 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 ADIPOR2Q86V24 386 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 ZNF566Q969W8 418 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 GPRC5BQ9NZH0 403 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 TRIOO75962 3097 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 METTL15A6NJ78 407 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 CENPBD1B2RD01 187 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 SLC16A6O15403 523 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 TSPAN6O43657 245 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 EBLN1P0CF75 366 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 AOAHP28039 575 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 LIPAP38571 399 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 SYTL3Q4VX76 610 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 OR4F3Q6IEY1 312 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 TTC23LQ6PF05 361 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 SIX5Q8N196 739 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 C12orf76Q8N812 135 aaPredicted RBP15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 ASCC1Q8N9N2 400 aaKnown RBP15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 ZNF540Q8NDQ6 660 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 GPR156Q8NFN8 814 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 OR2B2Q9GZK3 357 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 SPHK2Q9NRA0 654 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 SLC28A1O00337 649 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 TIMP1P01033 207 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 GBAP04062 536 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 BDKRB1P46663 353 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 EPS8Q12929 822 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 GRIK2Q13002 908 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 NAE1Q13564 534 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 MPP7Q5T2T1 576 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 AGAP6Q5VW22 663 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 LYPLAL1Q5VWZ2 237 aa15.01□□□□□ -0.01
SHROOM1-201ENST00000319854 MSRB3Q8IXL7 192 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms