RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 NUSAP1Q9BXS6 441 aaKnown RBP7.3□□□□□ -1.24
CDHR3-201ENST00000317716 RACGAP1Q9H0H5 632 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 TTYH1Q9H313 450 aaPredicted RBP7.3□□□□□ -1.24
CDHR3-201ENST00000317716 TMEM138Q9NPI0 162 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 ACSL6Q9UKU0 697 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 CDH7Q9ULB5 785 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 FZD4Q9ULV1 537 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 TLX2O43763 284 aaPredicted RBP7.3□□□□□ -1.24
CDHR3-201ENST00000317716 JRKO75564 520 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 CLDN9O95484 217 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 PTTG1O95997 202 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 PLATP00750 562 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 DARSP14868 501 aaKnown RBP7.3□□□□□ -1.24
CDHR3-201ENST00000317716 PAICSP22234 425 aaKnown RBP7.3□□□□□ -1.24
CDHR3-201ENST00000317716 CPN2P22792 545 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 GKP32189 559 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 TNFSF8P32971 234 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 CSTF2P33240 577 aaKnown RBP eCLIP7.3□□□□□ -1.24
CDHR3-201ENST00000317716 STC1P52823 247 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 UGT2B15P54855 530 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 ITGA1P56199 1179 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 MVKQ03426 396 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 TAF10Q12962 218 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 NAE1Q13564 534 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 E2F2Q14209 437 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 LRRC26Q2I0M4 334 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 TIGD5Q53EQ6 642 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 HACD2Q6Y1H2 254 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 C11orf65Q8NCR3 313 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 HMGCLL1Q8TB92 370 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 GANCQ8TET4 914 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 COQ8BQ96D53 544 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 COL21A1Q96P44 957 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 FAM83DQ9H4H8 585 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 GPRC5BQ9NZH0 403 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 PCDHA9Q9Y5H5 950 aa7.3□□□□□ -1.24
CDHR3-201ENST00000317716 A0A0D9SEW6 157 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 OR2AG2A6NM03 316 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 MAFKO60675 156 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 EVI2BP34910 448 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 MAZP56270 477 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TARDBPQ13148 414 aaKnown RBP eCLIP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TRIM71Q2Q1W2 868 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 NADSYN1Q6IA69 706 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TMEM207Q6UWW9 146 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 ZNF438Q7Z4V0 828 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 LAX1Q8IWV1 398 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 SLC5A8Q8N695 610 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 OR2T11Q8NH01 316 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 DNASE1L2Q92874 299 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 NTAN1Q96AB6 310 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 FOPNLQ96NB1 174 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 ZNF599Q96NL3 588 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 FCRL4Q96PJ5 515 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 SLC9A7Q96T83 725 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 MRPL15Q9P015 296 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 PADI3Q9ULW8 664 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 FCF1Q9Y324 198 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 NCOR1O75376 2440 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 LOC102723532A0A0G2JNH3 316 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 A0A1W2PRG6 482 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 PRR23AA6NEV1 266 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 INMT-MINDY4F8WBC2 141 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 OR7A10O76100 309 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 IFNA14P01570 189 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TP53P04637 393 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 BCKDHAP12694 445 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 CD72P21854 359 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 EIF2DP41214 584 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 ATP4BP51164 291 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 SMSP52788 366 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 CNTN1Q12860 1018 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 MAB21L1Q13394 359 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 INTS6LQ5JSJ4 861 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 NXNL2Q5VZ03 156 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 FBXL22Q6P050 247 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 PNCKQ6P2M8 343 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 TMPRSS11BQ86T26 416 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 MARCH9Q86YJ5 346 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 ZNF366Q8N895 744 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 YIPF7Q8N8F6 280 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 HJURPQ8NCD3 748 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 RASSF5Q8WWW0 418 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 C16orf70Q9BSU1 422 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 ALOXE3Q9BYJ1 711 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 MIOSQ9NXC5 875 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 ADAM30Q9UKF2 790 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 MAPRE3Q9UPY8 281 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 BAIAP2Q9UQB8 552 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 SLC22A14Q9Y267 594 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 PCDHGB3Q9Y5G1 929 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 LOC105369274A0A096LPK9 316 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 A0A1W2PPK0 400 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 A0A1W2PQL4 384 aaPredicted RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 SLC30A4O14863 429 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 AKR7A2O43488 359 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 ERAL1O75616 437 aaKnown RBP7.29□□□□□ -1.24
CDHR3-201ENST00000317716 PTHP01270 115 aa7.29□□□□□ -1.24
CDHR3-201ENST00000317716 EDNRBP24530 442 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms