RNA–Protein interactions for RNA: ENST00000316052.5

EXOSC4-201, Transcript of exosome component 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC4, Length 887 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-201ENST00000316052 IARS2Q9NSE4 1012 aaKnown RBP16.47■□□□□ 0.23
EXOSC4-201ENST00000316052 EIF3FO00303 357 aaPredicted RBP16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 CCL21O00585 134 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 MAN1A2O60476 641 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 RDH16O75452 317 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 CYC1P08574 325 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 GABRB3P28472 473 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 ART3Q13508 389 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 NAE1Q13564 534 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 PTK6Q13882 451 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 CYP1B1Q16678 543 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 ZNF766Q5HY98 468 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 CCDC137Q6PK04 289 aaKnown RBP16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 AGTRAPQ6RW13 159 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 LRRC8AQ8IWT6 810 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 BEST3Q8N1M1 668 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 CAMKVQ8NCB2 501 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 SUN3Q8TAQ9 357 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 PCBD2Q9H0N5 130 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 PARVBQ9HBI1 364 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 TEKT2Q9UIF3 430 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 TRMT6Q9UJA5 497 aaKnown RBP16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 CCDC168Q8NDH2 2452 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 CACNA1CQ13936 2221 aa16.46■□□□□ 0.23
EXOSC4-201ENST00000316052 NCOA6Q14686 2063 aaPredicted RBP16.46■□□□□ 0.22
EXOSC4-201ENST00000316052 DNAJB6O75190 326 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 CDH1P12830 882 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 NPPBP16860 134 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 CD96P40200 585 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 CA7P43166 264 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 CDKN2DP55273 166 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 CCZ1BP86790 482 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 CCZ1P86791 482 aaPredicted RBP16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 TUBA3CQ13748 450 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 PHKG1Q16816 387 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 CAPN13Q6MZZ7 669 aaPredicted RBP16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 TUBA3EQ6PEY2 450 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 PAQR3Q6TCH7 311 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 PCGF5Q86SE9 256 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 MRGPRGQ86SM5 289 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 ASPGQ86U10 573 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 C17orf64Q86WR6 236 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 CRLF3Q8IUI8 442 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 MCEMP1Q8IX19 187 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 C2CD4AQ8NCU7 369 aaPredicted RBP16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 MDS2Q8NDY4 140 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 OR5T3Q8NGG3 340 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 SLC13A3Q8WWT9 602 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 ALKBH8Q96BT7 664 aaKnown RBP16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 ZNF354BQ96LW1 612 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 SIGLEC12Q96PQ1 595 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 SGPP1Q9BX95 441 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 HES7Q9BYE0 225 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 KCNK13Q9HB14 408 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 ANKHQ9HCJ1 492 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 ANKRD10Q9NXR5 420 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 C19orf25Q9UFG5 118 aaPredicted RBP16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 SH3BGRL2Q9UJC5 107 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 PPP2R2CQ9Y2T4 447 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 NAALAD2Q9Y3Q0 740 aa16.45■□□□□ 0.22
EXOSC4-201ENST00000316052 ZNF860A6NHJ4 632 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 CDC123O75794 336 aaPredicted RBP16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 C8GP07360 202 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 MYBL2P10244 700 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 PGGT1BP53609 377 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 RHAGQ02094 409 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 SFT2D3Q587I9 215 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 RBM20Q5T481 1227 aaKnown RBP16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 MFSD9Q8NBP5 474 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 PLPP5Q8NEB5 264 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 M1APQ8TC57 530 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 MOCOSQ96EN8 888 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 PEX11GQ96HA9 241 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 PBKQ96KB5 322 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 FAM167BQ9BTA0 163 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 RBCK1Q9BYM8 510 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 KLHL1Q9NR64 748 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 LANCL2Q9NS86 450 aa16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 KLF2Q9Y5W3 355 aaPredicted RBP16.44■□□□□ 0.22
EXOSC4-201ENST00000316052 BANF1O75531 89 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 AGTR2P50052 363 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 MEF2AQ02078 507 aaPredicted RBP16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 CRYMQ14894 314 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 ABRAXAS2Q15018 415 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 NSDHLQ15738 373 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 SPINK14Q6IE38 97 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 UGT3A1Q6NUS8 523 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 PAPD4Q6PIY7 484 aaKnown RBP16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 LCTLQ6UWM7 567 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 AFAP1L2Q8N4X5 818 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 TSLPQ969D9 159 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 OR4K3Q96R72 315 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 MMP25Q9NPA2 562 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 TAS2R13Q9NYV9 303 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 SUCOQ9UBS9 1254 aaKnown RBP16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 PCDHGB6Q9Y5F9 930 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 SLC22A7Q9Y694 548 aa16.43■□□□□ 0.22
EXOSC4-201ENST00000316052 SLC16A5O15375 505 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms