RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 AASDHQ4L235 1098 aaPredicted RBP16.04■□□□□ 0.16
CLCF1-201ENST00000312438 KHDRBS2Q5VWX1 349 aaKnown RBP16.04■□□□□ 0.16
CLCF1-201ENST00000312438 OR4F3Q6IEY1 312 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 CYP2R1Q6VVX0 501 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 CAMKMTQ7Z624 323 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 ADCK2Q7Z695 626 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 SLC9B2Q86UD5 537 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 AQP12AQ8IXF9 295 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 UBALD2Q8IYN6 164 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 CADM4Q8NFZ8 388 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 TTLQ8NG68 377 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 CDC26Q8NHZ8 85 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.04■□□□□ 0.16
CLCF1-201ENST00000312438 CLDN23Q96B33 292 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 GBP5Q96PP8 586 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 ECSITQ9BQ95 431 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 THUMPD3Q9BV44 507 aaKnown RBP16.04■□□□□ 0.16
CLCF1-201ENST00000312438 CHRDQ9H2X0 955 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 TBC1D17Q9HA65 648 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 AASDHPPTQ9NRN7 309 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 FAM120CQ9NX05 1096 aaKnown RBP16.04■□□□□ 0.16
CLCF1-201ENST00000312438 EGFL7Q9UHF1 273 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 MCM8Q9UJA3 840 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 C15orf41Q9Y2V0 281 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 LRRC42Q9Y546 428 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 PCDHB14Q9Y5E9 798 aa16.04■□□□□ 0.16
CLCF1-201ENST00000312438 TRBV23OR9-2A0A075B6M9 112 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 SCAMP2O15127 329 aaKnown RBP16.03■□□□□ 0.16
CLCF1-201ENST00000312438 CD27P26842 260 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 CMPK1P30085 196 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 HPCAL1P37235 193 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 MTPNP58546 118 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 CPTPQ5TA50 214 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 LCN8Q6JVE9 175 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 TMEM132CQ8N3T6 1108 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 GOLM1Q8NBJ4 401 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 VPS37AQ8NEZ2 397 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 OR2L3Q8NG85 312 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 SLC22A18Q96BI1 424 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 MS4A8Q9BY19 250 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 REXO4Q9GZR2 422 aaKnown RBP16.03■□□□□ 0.16
CLCF1-201ENST00000312438 SRMSQ9H3Y6 488 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 SPHK1Q9NYA1 384 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 SLC25A37Q9NYZ2 338 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 NEUROG3Q9Y4Z2 214 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 EYSQ5T1H1 3165 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 TRBV5-3A0A0A0MS03 114 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 PRSS51A0A1B0GVH4 220 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 TRBC2A0A5B9 178 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 OR5K4A6NMS3 321 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 ISM1B1AKI9 464 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 RFXANKO14593 260 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 LCMT2O60294 686 aaKnown RBP16.03■□□□□ 0.16
CLCF1-201ENST00000312438 SCN2BO60939 215 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 TBX6O95947 436 aaPredicted RBP16.03■□□□□ 0.16
CLCF1-201ENST00000312438 KLK1P06870 262 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 CHRM5P08912 532 aaPredicted RBP16.03■□□□□ 0.16
CLCF1-201ENST00000312438 CTSEP14091 401 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 RPL3P39023 403 aaKnown RBP16.03■□□□□ 0.16
CLCF1-201ENST00000312438 PXNP49023 591 aaPredicted RBP16.03■□□□□ 0.16
CLCF1-201ENST00000312438 SELPLGQ14242 412 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 FXNQ16595 210 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 DUOXA1Q1HG43 343 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 ANXA8L1Q5VT79 327 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 PRPF38BQ5VTL8 546 aaKnown RBP16.03■□□□□ 0.16
CLCF1-201ENST00000312438 PROSER1Q86XN7 944 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 MSRB3Q8IXL7 192 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 PQLC1Q8N2U9 271 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 TBC1D19Q8N5T2 526 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 WDR48Q8TAF3 677 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 COQ8BQ96D53 544 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 CENPKQ9BS16 269 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 DUSP26Q9BV47 211 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 PRDM6Q9NQX0 595 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 TAAR2Q9P1P5 351 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 ATP6V1HQ9UI12 483 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 KLF15Q9UIH9 416 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 SNX7Q9UNH6 387 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 AP4S1Q9Y587 144 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 PCDHB3Q9Y5E6 796 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 SNX13Q9Y5W8 968 aa16.03■□□□□ 0.16
CLCF1-201ENST00000312438 C19orf67A6NJJ6 358 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 NVLO15381 856 aaKnown RBP16.02■□□□□ 0.16
CLCF1-201ENST00000312438 CLEC3AO75596 197 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 LAMP1P11279 417 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 GSTM2P28161 218 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 PEBP1P30086 187 aaKnown RBP16.02■□□□□ 0.16
CLCF1-201ENST00000312438 SLC7A1P30825 629 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 GRIA3P42263 894 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 RPS9P46781 194 aaKnown RBP16.02■□□□□ 0.16
CLCF1-201ENST00000312438 WNT3P56703 355 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 CYP4F2P78329 520 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 CYP4F3Q08477 520 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 LRRC74AQ0VAA2 488 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 PAGE2Q7Z2X7 111 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 R3HCC1LQ7Z5L2 792 aaKnown RBP16.02■□□□□ 0.16
CLCF1-201ENST00000312438 PARGQ86W56 976 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 ANKRD46Q86W74 232 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 SPPL2CQ8IUH8 684 aa16.02■□□□□ 0.16
CLCF1-201ENST00000312438 MFSD2AQ8NA29 543 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms