RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 STARP49675 285 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 CLCN5P51795 746 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 AP1S2P56377 157 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 CSHL1Q14406 222 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 SSX2Q16385 188 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 ADPRMQ3LIE5 342 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 GPR158Q5T848 1215 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 MACC1Q6ZN28 852 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 OR6M1Q8NGM8 313 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 WFDC5Q8TCV5 224 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 C2orf15Q8WU43 125 aaKnown RBP9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 MARVELD3Q96A59 401 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 ZDHHC12Q96GR4 267 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 NARS2Q96I59 477 aaKnown RBP9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 RPRD1AQ96P16 312 aaPredicted RBP9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 SLC22A12Q96S37 553 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 NPAS1Q99742 590 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 ESRP2Q9H6T0 727 aaKnown RBP9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 GKN1Q9NS71 199 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 VPS28Q9UK41 221 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 FBXL21Q9UKT6 434 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 SLC30A4O14863 429 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 KDELR3O43731 214 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 PRAMEF12O95522 483 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 ACADLP28330 430 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 SMSP52788 366 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 YBEYP58557 167 aaPredicted RBP9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 PRKAA1Q13131 559 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 C9orf152Q5JTZ5 239 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 ZNF678Q5SXM1 525 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 SEL1L3Q68CR1 1132 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 CHMP1BQ7LBR1 199 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 FAM110BQ8TC76 370 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 SLC7A6Q92536 515 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 SMG7Q92540 1137 aaKnown RBP9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 TCEAL3Q969E4 200 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 MYDGFQ969H8 173 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 ZNF689Q96CS4 500 aaPredicted RBP9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 ATOH8Q96SQ7 321 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 TUBB1Q9H4B7 451 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 IMPAD1Q9NX62 359 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 THUMPD1Q9NXG2 353 aaKnown RBP9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 DTX4Q9Y2E6 619 aa9.22□□□□□ -0.93
RBFOX1-201ENST00000311745 DOCK6Q96HP0 2047 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 TEX46H3BTG2 121 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 GAPDHSO14556 408 aaPredicted RBP9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 ACOT8O14734 319 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 FPGTO14772 594 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 TRIM24O15164 1050 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 KLK3P07288 261 aaPredicted RBP9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 IL7RP16871 459 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 ATP5F1P24539 256 aaPredicted RBP9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 NUP62P37198 522 aaPredicted RBP9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 CAPGP40121 348 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 PGDP52209 483 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 RGS1Q08116 209 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 DUSP6Q16828 381 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 ANGPTL8Q6UXH0 198 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 RASSF6Q6ZTQ3 369 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 TMCO2Q7Z6W1 182 aaPredicted RBP9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 OR6C4Q8NGE1 309 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 LINC00052Q96N35 136 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 ZNF599Q96NL3 588 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 NPAS2Q99743 824 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 PAPOLGQ9BWT3 736 aaKnown RBP9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 BRD9Q9H8M2 597 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 FBXO8Q9NRD0 319 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 SLC22A11Q9NSA0 550 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 NLE1Q9NVX2 485 aaPredicted RBP9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 COA4Q9NYJ1 87 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 ZNF225Q9UK10 706 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 SARDHQ9UL12 918 aa9.21□□□□□ -0.93
RBFOX1-201ENST00000311745 MTCL1Q9Y4B5 1905 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 A0A1B0GWJ7 208 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 H7C2Y5 167 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 CLN5O75503 358 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 ATG12O94817 140 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 IPO13O94829 963 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 ALDOCP09972 364 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 PTX3P26022 381 aaPredicted RBP9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 UGT2B10P36537 528 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 FNTBP49356 437 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 GBX2P52951 348 aaPredicted RBP9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 FOXA1P55317 472 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 COTL1Q14019 142 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 CCNJQ5T5M9 372 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 PLCZ1Q86YW0 608 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 CHPFQ8IZ52 775 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 RAB7BQ96AH8 199 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 RAD51AP1Q96B01 352 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 MRPL48Q96GC5 212 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 HS6ST2Q96MM7 605 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 VRK1Q99986 396 aaPredicted RBP9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 FAM96AQ9H5X1 160 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 ZFP14Q9HCL3 533 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 ERVK13-1Q9NX77 482 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 LHX3Q9UBR4 397 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 CNOT6Q9ULM6 557 aaKnown RBP9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 PTGDR2Q9Y5Y4 395 aa9.21□□□□□ -0.94
RBFOX1-201ENST00000311745 BACE2Q9Y5Z0 518 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms