RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 PON3Q15166 354 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 OASLQ15646 514 aaKnown RBP3.1□□□□□ -1.91
CLOCK-201ENST00000309964 RGS21Q2M5E4 152 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 IL23RQ5VWK5 629 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 SPESP1Q6UW49 350 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 PLEKHG7Q6ZR37 379 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 OR5L1Q8NGL2 311 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 MROQ9BYG7 248 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 CPEB1Q9BZB8 566 aaKnown RBP3.1□□□□□ -1.91
CLOCK-201ENST00000309964 SLC6A16Q9GZN6 736 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 EMC3Q9P0I2 261 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 KLHL13Q9P2N7 655 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 AASSQ9UDR5 926 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 PCDHGC4Q9Y5F7 938 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 RGPD3A6NKT7 1758 aaPredicted RBP3.1□□□□□ -1.91
CLOCK-201ENST00000309964 WNK2Q9Y3S1 2297 aa3.1□□□□□ -1.91
CLOCK-201ENST00000309964 LEFTY2O00292 366 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MMP20O60882 483 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 KLHL18O94889 574 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 KDM4BO94953 1096 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SEMA4FO95754 770 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 BPGMP07738 259 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MPC1LP0DKB6 136 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 COX4I1P13073 169 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 AFF3P51826 1226 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MPP1Q00013 466 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 GALNT2Q10471 571 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 TRIM32Q13049 653 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 TCEAL1Q15170 157 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 LY6G5CQ5SRR4 150 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 GLYATQ6IB77 296 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 FBXL22Q6P050 247 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 DNAJC14Q6Y2X3 702 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MISPQ8IVT2 679 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PACRGLQ8N7B6 248 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 DTX3Q8N9I9 347 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CPEB3Q8NE35 698 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 C16orf70Q9BSU1 422 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SDCBP2Q9H190 292 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MYNNQ9NPC7 610 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CHST7Q9NS84 486 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PAQR5Q9NXK6 330 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 POU2F3Q9UKI9 436 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 WDR45Q9Y484 360 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CAPN8A6NHC0 703 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 NPIPA2E9PIF3 369 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 NPIPA3F8WFD2 350 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 OR2T1O43869 369 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PRAMEF2O60811 474 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PEX14O75381 377 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 POP7O75817 140 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MT-CYBP00156 380 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PDYNP01213 254 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ATP6V1B1P15313 513 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PGCP20142 388 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 STARP49675 285 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 DNAJB13P59910 316 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PRPS1P60891 318 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SCN1BQ07699 218 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ABHD18Q0P651 414 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ATP1A4Q13733 1029 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 TRIM25Q14258 630 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CST6Q15828 149 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MLIPQ5VWP3 458 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 RTL6Q6ICC9 239 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ADNP2Q6IQ32 1131 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 IZUMO2Q6UXV1 221 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SSX8Q7RTT4 187 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ZER1Q7Z7L7 766 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CILP2Q8IUL8 1156 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SLITRK4Q8IW52 837 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 DND1Q8IYX4 353 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CPXM2Q8N436 756 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 DENND6BQ8NEG7 585 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 OR9A4Q8NGU2 314 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 FAM3CQ92520 227 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CENPNQ96H22 339 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 NPAS2Q99743 824 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 LMF2Q9BU23 707 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 C6orf62Q9GZU0 229 aaPredicted RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ENY2Q9NPA8 101 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 TRIM36Q9NQ86 728 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 MCUBQ9NWR8 336 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 PARPBPQ9NWS1 579 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 UTS2RQ9UKP6 389 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 OTOFQ9HC10 1997 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 KIF26BQ2KJY2 2108 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SCN1AP35498 2009 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 DNAJC25-GNG10A0A024R161 153 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 C17orf113A0A1B0GUU1 675 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 FUOMA2VDF0 154 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 TMEM150BA6NC51 233 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 SCAMP3O14828 347 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CBFA2T3O75081 653 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ANXA2P07355 339 aaKnown RBP3.09□□□□□ -1.91
CLOCK-201ENST00000309964 C7P10643 843 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 ETV6P41212 452 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 CPA2P48052 419 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 HSPA7P48741 367 aa3.09□□□□□ -1.91
CLOCK-201ENST00000309964 LBX1P52954 281 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms