RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 KIR3DX1Q9H7L2 352 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 LMAN1LQ9HAT1 526 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 CUEDC1Q9NWM3 386 aaPredicted RBP11.41□□□□□ -0.58
TRIM40-205ENST00000307859 SCHIP1Q9P0W5 487 aaPredicted RBP11.41□□□□□ -0.58
TRIM40-205ENST00000307859 TBC1D29Q9UFV1 150 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 PNMA8BQ9ULN7 279 aaPredicted RBP11.41□□□□□ -0.58
TRIM40-205ENST00000307859 CA14Q9ULX7 337 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 ICKQ9UPZ9 632 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 DMTF1Q9Y222 760 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 AP3M1Q9Y2T2 418 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 SNX13Q9Y5W8 968 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 R4GN57 208 aa11.41□□□□□ -0.58
TRIM40-205ENST00000307859 ZFHX4Q86UP3 3567 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 A6NCN8 305 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 SCAMP1O15126 338 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 SCAMP2O15127 329 aaKnown RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 PRICKLE3O43900 615 aaPredicted RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 PCDH7O60245 1069 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 LRATO95237 230 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 ACADSP16219 412 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 OXTRP30559 389 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 SLC7A1P30825 629 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 NUDT1P36639 197 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 RABIFP47224 123 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 CCR8P51685 355 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 WNT3P56703 355 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 MTPNP58546 118 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 SRP54P61011 504 aaKnown RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 FZD5Q13467 585 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 GAS6Q14393 721 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 TAF11Q15544 211 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 SF1Q15637 639 aaKnown RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 ALG11Q2TAA5 492 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 RUNDC3AQ59EK9 446 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 ICE2Q659A1 982 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 ANO7Q6IWH7 933 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 CYP2R1Q6VVX0 501 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 METTL4Q8N3J2 472 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 GPR156Q8NFN8 814 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 OR2A1Q8NGT9 310 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 NELL1Q92832 810 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 TSACCQ96A04 125 aaPredicted RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 SLCO4A1Q96BD0 722 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 CXorf40BQ96DE9 158 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 TOE1Q96GM8 510 aaKnown RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 ZNF570Q96NI8 536 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 SH3GL1Q99961 368 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 CPPED1Q9BRF8 314 aaPredicted RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 REXO4Q9GZR2 422 aaKnown RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 VCX3BQ9H321 246 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 GPR27Q9NS67 375 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 C2orf42Q9NWW7 574 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 FAM120CQ9NX05 1096 aaKnown RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 TRNAU1APQ9NX07 287 aaKnown RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 WSB2Q9NYS7 404 aaPredicted RBP11.4□□□□□ -0.58
TRIM40-205ENST00000307859 EGFL7Q9UHF1 273 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 CYP8B1Q9UNU6 501 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 PCDHB3Q9Y5E6 796 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 DGKBQ9Y6T7 804 aa11.4□□□□□ -0.58
TRIM40-205ENST00000307859 AKAP10O43572 662 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 KDM1AO60341 852 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 SCN2BO60939 215 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 SEMA3DO95025 777 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 EML2O95834 649 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 TGFB1P01137 390 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 CAPNS1P04632 268 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 ANXA4P09525 319 aaPredicted RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 ATP6V1C1P21283 382 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 PTX3P26022 381 aaPredicted RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 AK4P27144 223 aaPredicted RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 PEX2P28328 305 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 NDUFS1P28331 727 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 GRIA3P42263 894 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 PLIN5Q00G26 463 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 PRDX1Q06830 199 aaKnown RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 CYP4F3Q08477 520 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 ZNF763Q0D2J5 394 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 KRT33BQ14525 404 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 PGS1Q32NB8 556 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 AASDHQ4L235 1098 aaPredicted RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 OGFRL1Q5TC84 451 aaPredicted RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 OR4F3Q6IEY1 312 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 Q6ZSR6 202 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 COMMD6Q7Z4G1 85 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 IFNEQ86WN2 208 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 PROSER1Q86XN7 944 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 LILRA2Q8N149 483 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 ANKRD53Q8N9V6 530 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 SUMF1Q8NBK3 374 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 TSTD1Q8NFU3 115 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 OR7A2PQ8NGA2 310 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 GFM2Q969S9 779 aaKnown RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 CCDC115Q96NT0 180 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 ZNF184Q99676 751 aaPredicted RBP11.39□□□□□ -0.59
TRIM40-205ENST00000307859 INPP5KQ9BT40 448 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 MS4A8Q9BY19 250 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 OR51B5Q9H339 312 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 XKR8Q9H6D3 395 aa11.39□□□□□ -0.59
TRIM40-205ENST00000307859 LTB4R2Q9NPC1 389 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms