RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 EBPLQ9BY08 206 aa16.79■□□□□ 0.28
KRT28-201ENST00000306658 MS4A8Q9BY19 250 aa16.79■□□□□ 0.28
KRT28-201ENST00000306658 CLMPQ9H6B4 373 aa16.79■□□□□ 0.28
KRT28-201ENST00000306658 UCKL1Q9NWZ5 548 aa16.79■□□□□ 0.28
KRT28-201ENST00000306658 ANKMY1Q9P2S6 941 aa16.79■□□□□ 0.28
KRT28-201ENST00000306658 PRPF19Q9UMS4 504 aaKnown RBP16.79■□□□□ 0.28
KRT28-201ENST00000306658 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.79■□□□□ 0.28
KRT28-201ENST00000306658 TP53BP1Q12888 1972 aaPredicted RBP16.79■□□□□ 0.28
KRT28-201ENST00000306658 HAT1O14929 419 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 TNFSF14O43557 240 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 PCDH7O60245 1069 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 RXRGP48443 463 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 RAP1GDS1P52306 607 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 RAE1P78406 368 aaKnown RBP16.78■□□□□ 0.28
KRT28-201ENST00000306658 SIM2Q14190 667 aaPredicted RBP16.78■□□□□ 0.28
KRT28-201ENST00000306658 ZNF528Q3MIS6 628 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 TIGD2Q4W5G0 525 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 SPESP1Q6UW49 350 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 COMMD6Q7Z4G1 85 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 RETREG3Q86VR2 466 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 C17orf82Q86X59 251 aaPredicted RBP16.78■□□□□ 0.28
KRT28-201ENST00000306658 ULK2Q8IYT8 1036 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 KRTCAP2Q8N6L1 136 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 STARD8Q92502 1023 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 PIGKQ92643 395 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 ZUFSPQ96AP4 578 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 CROTQ9UKG9 612 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 AP1M2Q9Y6Q5 423 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 PI4KAP42356 2102 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 A0A088AWK7 358 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 OR5K3A6NET4 321 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 SAP18O00422 153 aaKnown RBP16.78■□□□□ 0.28
KRT28-201ENST00000306658 PPM1DO15297 605 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 NPPAP01160 153 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 BCL6P41182 706 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 DPP6P42658 865 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 PSME3P61289 254 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 RPS15AP62244 130 aaKnown RBP16.78■□□□□ 0.28
KRT28-201ENST00000306658 DPY19L1Q2PZI1 675 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 FAM174BQ3ZCQ3 159 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 BNC2Q6ZN30 1099 aaPredicted RBP16.78■□□□□ 0.28
KRT28-201ENST00000306658 PAGE2Q7Z2X7 111 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 BMP8AQ7Z5Y6 402 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 PAQR7Q86WK9 346 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 ZNF761Q86XN6 746 aaPredicted RBP16.78■□□□□ 0.28
KRT28-201ENST00000306658 MFSD9Q8NBP5 474 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 FAM13CQ8NE31 585 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 TESCQ96BS2 214 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 EGLN2Q96KS0 407 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 TMEM74Q96NL1 305 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 SLC38A3Q99624 504 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 HOPXQ9BPY8 73 aaPredicted RBP16.78■□□□□ 0.28
KRT28-201ENST00000306658 ZSCAN32Q9NX65 697 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 MAP10Q9P2G4 905 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 KLHL20Q9Y2M5 609 aa16.78■□□□□ 0.28
KRT28-201ENST00000306658 OR2A25A4D2G3 310 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 LILRA5A6NI73 299 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 GPR37L1O60883 481 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 CIB2O75838 187 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 UBXN7O94888 489 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 SERPIND1P05546 499 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 PGRP06401 933 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 HOXD12P35452 270 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 TLR1Q15399 786 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 C14orf28Q4W4Y0 310 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 TMEM35AQ53FP2 167 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 FIGLAQ6QHK4 219 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 RABEPKQ7Z6M1 372 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 RIMKLAQ8IXN7 391 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 CREB3L4Q8TEY5 395 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 RGMAQ96B86 450 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 QRFPRQ96P65 431 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 F2RL3Q96RI0 385 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 CDRT15Q96T59 188 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 MCM8Q9UJA3 840 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 PCDHGA4Q9Y5G9 962 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 KLK4Q9Y5K2 254 aa16.77■□□□□ 0.28
KRT28-201ENST00000306658 TNRC6BQ9UPQ9 1833 aaKnown RBP16.77■□□□□ 0.27
KRT28-201ENST00000306658 CABIN1Q9Y6J0 2220 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 A0A0J9YY10 115 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 TBX6O95947 436 aaPredicted RBP16.76■□□□□ 0.27
KRT28-201ENST00000306658 TYRP1P17643 537 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 MAGP20916 626 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 S100A3P33764 101 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 DGKQP52824 942 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 C21orf58P58505 322 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 BNC1Q01954 994 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 RELAQ04206 551 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 SRSF11Q05519 484 aaKnown RBP16.76■□□□□ 0.27
KRT28-201ENST00000306658 ZNF763Q0D2J5 394 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 BNIP3Q12983 259 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 NFYCQ13952 458 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 SPANXN4Q5MJ08 99 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 C6orf132Q5T0Z8 1188 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 C6orf163Q5TEZ5 329 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 PEAR1Q5VY43 1037 aaPredicted RBP16.76■□□□□ 0.27
KRT28-201ENST00000306658 PRMT9Q6P2P2 845 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 TRIM73Q86UV7 250 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 FBXW8Q8N3Y1 598 aa16.76■□□□□ 0.27
KRT28-201ENST00000306658 DPP10Q8N608 796 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms