RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 OARD1Q9Y530 152 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 A8MUA0 341 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 GBAP04062 536 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 MPC1LP0DKB6 136 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 ZNF12P17014 697 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 ACADLP28330 430 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 ETV3P41162 512 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 DHPSP49366 369 aaPredicted RBP15.44■□□□□ 0.06
USP42-201ENST00000306177 ZUFSPQ96AP4 578 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 NDC1Q9BTX1 674 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 LGR4Q9BXB1 951 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 DLGAP4Q9Y2H0 992 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 CPED1A4D0V7 1026 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 TOR1BO14657 336 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 LATS1O95835 1130 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 TACSTD2P09758 323 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 AGXTP21549 392 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 CAMK1Q14012 370 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 PCBP2Q15366 365 aaKnown RBP eCLIP15.44■□□□□ 0.061e-8■■□□□ 14.3
USP42-201ENST00000306177 ZBED5Q49AG3 693 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 RTP2Q5QGT7 225 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 MORN1Q5T089 497 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 DPY19L3Q6ZPD9 716 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 GKN2Q86XP6 184 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 RAB7BQ96AH8 199 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 CNDP2Q96KP4 475 aaKnown RBP15.44■□□□□ 0.06
USP42-201ENST00000306177 PHF24Q9UPV7 400 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 BACE2Q9Y5Z0 518 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 MYH11P35749 1972 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 FAM170BA6NMN3 283 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 TRIM3O75382 744 aaPredicted RBP15.44■□□□□ 0.06
USP42-201ENST00000306177 S1PR4O95977 384 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 PITPNAQ00169 270 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 PAMR1Q6UXH9 720 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 KLHL6Q8WZ60 621 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 GLYATL1Q969I3 302 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 TMLHEQ9NVH6 421 aa15.44■□□□□ 0.06
USP42-201ENST00000306177 STC2O76061 302 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 HNRNPA1P09651 372 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP42-201ENST00000306177 STK19P49842 368 aaPredicted RBP15.43■□□□□ 0.06
USP42-201ENST00000306177 PUM1Q14671 1186 aaKnown RBP eCLIP15.43■□□□□ 0.067e-13■■■■□ 24.3
USP42-201ENST00000306177 C6orf89Q6UWU4 347 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 CMTR2Q8IYT2 770 aaKnown RBP15.43■□□□□ 0.06
USP42-201ENST00000306177 SLC22A15Q8IZD6 547 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 TM9SF3Q9HD45 589 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 SLC2A4RGQ9NR83 387 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 SETD1AO15047 1707 aaKnown RBP15.43■□□□□ 0.06
USP42-201ENST00000306177 FAM172BPA6NC97 362 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 SCDO00767 359 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 HOXC12P31275 282 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 MTTPP55157 894 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 VBP1P61758 197 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 AKIRIN2Q53H80 203 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 TMCO2Q7Z6W1 182 aaPredicted RBP15.43■□□□□ 0.06
USP42-201ENST00000306177 TRIM74Q86UV6 250 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 NR4A3Q92570 626 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 SCAMP4Q969E2 229 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 KCTD7Q96MP8 289 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 COMMD3Q9UBI1 195 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 C9J4A7 227 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 FANCGO15287 622 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 AKAP8O43823 692 aaKnown RBP15.43■□□□□ 0.06
USP42-201ENST00000306177 MATN1P21941 496 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 ABATP80404 500 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 HSF2Q03933 536 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 PPP1R8Q12972 351 aaKnown RBP15.43■□□□□ 0.06
USP42-201ENST00000306177 FBXO43Q4G163 708 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 TMEM130Q8N3G9 435 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 AQP11Q8NBQ7 271 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 OR52E4Q8NGH9 312 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 TNFAIP8L1Q8WVP5 186 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 SMPDL3BQ92485 455 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 EPYCQ99645 322 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.43■□□□□ 0.06
USP42-201ENST00000306177 REEP4Q9H6H4 257 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 SP140LQ9H930 580 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 A0A075B6Q4 140 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 NOS1APO75052 506 aaPredicted RBP15.43■□□□□ 0.06
USP42-201ENST00000306177 OAZ2O95190 189 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 ARHGDIBP52566 201 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 DIO3P55073 304 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 GSCP56915 257 aaPredicted RBP15.43■□□□□ 0.06
USP42-201ENST00000306177 SAMD11Q96NU1 681 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 LYARQ9NX58 379 aaKnown RBP15.43■□□□□ 0.06
USP42-201ENST00000306177 TNFRSF10DQ9UBN6 386 aa15.43■□□□□ 0.06
USP42-201ENST00000306177 PKD1L3Q7Z443 1732 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 CAPN5O15484 640 aaPredicted RBP15.42■□□□□ 0.06
USP42-201ENST00000306177 SLC35E2BP0CK96 405 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 SHMT2P34897 504 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 VLDLRP98155 873 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 PPP1R3AQ16821 1122 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 NADK2Q4G0N4 442 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 CYBRD1Q53TN4 286 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 STEAP4Q687X5 459 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 NCSTNQ92542 709 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 ALPK1Q96QP1 1244 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 CCDC106Q9BWC9 280 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 UPB1Q9UBR1 384 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 IRS2Q9Y4H2 1338 aa15.42■□□□□ 0.06
USP42-201ENST00000306177 MBLAC1A4D2B0 266 aaPredicted RBP15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms