RNA–Protein interactions for RNA: ENST00000306149.11

CSDC2-201, Transcript of cold shock domain containing C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDC2, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDC2-201ENST00000306149 CCR2P41597 374 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 RXRGP48443 463 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 ST13P50502 369 aaKnown RBP14.59□□□□□ -0.07
CSDC2-201ENST00000306149 AP1S2P56377 157 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 SLC7A9P82251 487 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 IFITM3Q01628 133 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 ZNF852Q6ZMS4 543 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 ADCK1Q86TW2 530 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 TMC8Q8IU68 726 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 OR52J3Q8NH60 311 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 DEFB118Q96PH6 123 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 LINC00597Q9H2U6 94 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 SLC25A13Q9UJS0 675 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 TESMINQ9Y4I5 508 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 PCDHB11Q9Y5F2 797 aa14.59□□□□□ -0.07
CSDC2-201ENST00000306149 TRAV19A0A0A6YYK7 116 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 GNG14A0A1W2PPG7 69 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 SAP18O00422 153 aaKnown RBP14.58□□□□□ -0.07
CSDC2-201ENST00000306149 RGS10O43665 173 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 WBP4O75554 376 aaKnown RBP14.58□□□□□ -0.07
CSDC2-201ENST00000306149 RRM2P31350 389 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 OR1E2P47887 323 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 NPRL3Q12980 569 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 NOGQ13253 232 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 INAQ16352 499 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 HIST2H2ACQ16777 129 aaPredicted RBP14.58□□□□□ -0.07
CSDC2-201ENST00000306149 SYT16Q17RD7 645 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 CPTPQ5TA50 214 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 KIAA1614Q5VZ46 1190 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 LIPJQ5W064 366 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 METTL3Q86U44 580 aaKnown RBP14.58□□□□□ -0.07
CSDC2-201ENST00000306149 OR8J2Q8NGG1 315 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 SPPL2AQ8TCT8 520 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 C7orf34Q96L11 122 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 HERC2P3Q9BVR0 1158 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 CPEB1Q9BZB8 566 aaKnown RBP14.58□□□□□ -0.07
CSDC2-201ENST00000306149 ACOT13Q9NPJ3 140 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 SPATA6Q9NWH7 488 aaPredicted RBP14.58□□□□□ -0.07
CSDC2-201ENST00000306149 SPG21Q9NZD8 308 aa14.58□□□□□ -0.07
CSDC2-201ENST00000306149 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.58□□□□□ -0.07
CSDC2-201ENST00000306149 NINQ8N4C6 2090 aa14.58□□□□□ -0.08
CSDC2-201ENST00000306149 EIF3FO00303 357 aaPredicted RBP14.58□□□□□ -0.08
CSDC2-201ENST00000306149 LRG1P02750 347 aa14.58□□□□□ -0.08
CSDC2-201ENST00000306149 IQCCQ4KMZ1 466 aa14.58□□□□□ -0.08
CSDC2-201ENST00000306149 ARSIQ5FYB1 569 aa14.58□□□□□ -0.08
CSDC2-201ENST00000306149 IER5LQ5T953 404 aa14.58□□□□□ -0.08
CSDC2-201ENST00000306149 AGAP7PQ5VUJ5 663 aa14.58□□□□□ -0.08
CSDC2-201ENST00000306149 TSPYL5Q86VY4 417 aaPredicted RBP14.58□□□□□ -0.08
CSDC2-201ENST00000306149 VWCEQ96DN2 955 aa14.58□□□□□ -0.08
CSDC2-201ENST00000306149 PITX2Q99697 317 aa14.58□□□□□ -0.08
CSDC2-201ENST00000306149 FAM120CQ9NX05 1096 aaKnown RBP14.58□□□□□ -0.08
CSDC2-201ENST00000306149 STOX2Q9P2F5 926 aaPredicted RBP14.58□□□□□ -0.08
CSDC2-201ENST00000306149 RUVBL1Q9Y265 456 aaKnown RBP14.58□□□□□ -0.08
CSDC2-201ENST00000306149 SCAMP2O15127 329 aaKnown RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 GRM6O15303 877 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 CCL16O15467 120 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 LEFTY1O75610 366 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 KCNJ10P78508 379 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 FADDQ13158 208 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 SP140Q13342 867 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 CAMK2GQ13555 558 aaPredicted RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 SYTL3Q4VX76 610 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 COX20Q5RI15 118 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 TMEM215Q68D42 235 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 OTOP2Q7RTS6 562 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 GPR155Q7Z3F1 870 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 SYNPOQ8N3V7 929 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 HUS1BQ8NHY5 278 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 DNASE1L2Q92874 299 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 TCEAL4Q96EI5 215 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 SIGLEC11Q96RL6 698 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 TMEM121BQ9BXQ6 578 aaPredicted RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 ANKHQ9HCJ1 492 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 CHD7Q9P2D1 2997 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 TTC34A8MYJ7 566 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 TMEM229AB2RXF0 380 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 CNOT3O75175 753 aaKnown RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 GCM2O75603 506 aaPredicted RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 C21orf33P30042 268 aaPredicted RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 CRATP43155 626 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 RPS13P62277 151 aaKnown RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 TLE2Q04725 743 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 CSTF3Q12996 717 aaKnown RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 RGNQ15493 299 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 ERICH5Q6P6B1 374 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 PLEKHG7Q6ZR37 379 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 TSEN54Q7Z6J9 526 aaKnown RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 RAVER1Q8IY67 606 aaKnown RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 ENTHD1Q8IYW4 607 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 RASGEF1AQ8N9B8 481 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 OR7G3Q8NG95 312 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 APH1BQ8WW43 257 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 IPCEF1Q8WWN9 437 aaPredicted RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 CLP1Q92989 425 aaKnown RBP14.57□□□□□ -0.08
CSDC2-201ENST00000306149 FCRL1Q96LA6 429 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 RLIMQ9NVW2 624 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 TRIM17Q9Y577 477 aa14.57□□□□□ -0.08
CSDC2-201ENST00000306149 MGAT4DA6NG13 374 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 E9PQ18 207 aa14.56□□□□□ -0.08
CSDC2-201ENST00000306149 SLC16A5O15375 505 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms