RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 POM121BA6NF01 834 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 SCAMP2O15127 329 aaKnown RBP17.24■□□□□ 0.35
CAPN1-201ENST00000279247 ACOX3O15254 700 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 NOBOXO60393 691 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 UMPSP11172 480 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 ETS2P15036 469 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 PRKACGP22612 351 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 MAPK9P45984 424 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 CDH15P55291 814 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 SRSF11Q05519 484 aaKnown RBP17.24■□□□□ 0.35
CAPN1-201ENST00000279247 C2orf80Q0P641 193 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 METRNLQ641Q3 311 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 TMEM184AQ6ZMB5 413 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 LRRC56Q8IYG6 542 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-201ENST00000279247 CHTF18Q8WVB6 975 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 MAGEB10Q96LZ2 347 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-201ENST00000279247 INSM2Q96T92 566 aaPredicted RBP17.24■□□□□ 0.35
CAPN1-201ENST00000279247 BDH2Q9BUT1 245 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 ADI1Q9BV57 179 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 LTB4R2Q9NPC1 389 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 PRDM8Q9NQV8 689 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 C5AR2Q9P296 337 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 VPS13AQ96RL7 3174 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 SNRNP200O75643 2136 aaKnown RBP17.24■□□□□ 0.35
CAPN1-201ENST00000279247 KMOO15229 486 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 E2F6O75461 281 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 CAPNS1P04632 268 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 RAP2AP10114 183 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 ALDH9A1P49189 494 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 ATP6AP1Q15904 470 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 SPATS1Q496A3 300 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 NHSL2Q5HYW2 709 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 CHERPQ8IWX8 916 aaKnown RBP17.24■□□□□ 0.35
CAPN1-201ENST00000279247 REPS1Q96D71 796 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 KLHL20Q9Y2M5 609 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 PIAS3Q9Y6X2 628 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 PLXND1Q9Y4D7 1925 aa17.24■□□□□ 0.35
CAPN1-201ENST00000279247 DLGAP1O14490 977 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 ASGR2P07307 311 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 RPS21P63220 83 aaKnown RBP17.23■□□□□ 0.35
CAPN1-201ENST00000279247 LRIF1Q5T3J3 769 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 TMTC4Q5T4D3 741 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 ATG9BQ674R7 924 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 ZNF786Q8N393 782 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 OR4A15Q8NGL6 344 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 OR5K2Q8NHB8 316 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 SIPA1Q96FS4 1042 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 F2RL3Q96RI0 385 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 BRF2Q9HAW0 419 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 AASDHPPTQ9NRN7 309 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 SUFUQ9UMX1 484 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 CKAP5Q14008 2032 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 NINQ8N4C6 2090 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 SCN2BO60939 215 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 DEAF1O75398 565 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-201ENST00000279247 CLPTM1O96005 669 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 IGFALSP35858 605 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 ADPRHP54922 357 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 IL1RL1Q01638 556 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 GAB1Q13480 694 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 SPIN4Q56A73 249 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 SPESP1Q6UW49 350 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 ZNF852Q6ZMS4 543 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 Q7L0L9 218 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 TP53I13Q8NBR0 393 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-201ENST00000279247 UGT2B28Q9BY64 529 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 TRIT1Q9H3H1 467 aaKnown RBP17.23■□□□□ 0.35
CAPN1-201ENST00000279247 SMURF2Q9HAU4 748 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 TPT1P8Q9HAU6 139 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 CNOT11Q9UKZ1 510 aaKnown RBP17.23■□□□□ 0.35
CAPN1-201ENST00000279247 PNMA8BQ9ULN7 279 aaPredicted RBP17.23■□□□□ 0.35
CAPN1-201ENST00000279247 MAN2B2Q9Y2E5 1009 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 ANKDD1BA6NHY2 528 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 TNFAIP8O95379 198 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 HPCAL1P37235 193 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 RPS9P46781 194 aaKnown RBP17.23■□□□□ 0.35
CAPN1-201ENST00000279247 UNC5DQ6UXZ4 953 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 VTCN1Q7Z7D3 282 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 FRMD1Q8N878 549 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 TEX101Q9BY14 249 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 NTN4Q9HB63 628 aa17.23■□□□□ 0.35
CAPN1-201ENST00000279247 hCG_2039718K7EN88 272 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 PPM1DO15297 605 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 FKBP9O95302 570 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 SMIM18P0DKX4 95 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 BMP8BP34820 402 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 SOAT1P35610 550 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 ZNF763Q0D2J5 394 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 MERTKQ12866 999 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 CYP2A13Q16696 494 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.22■□□□□ 0.35
CAPN1-201ENST00000279247 FKBP9P1Q75LS8 142 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 GALNT13Q8IUC8 556 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 FBXO15Q8NCQ5 510 aaPredicted RBP17.22■□□□□ 0.35
CAPN1-201ENST00000279247 TNIP2Q8NFZ5 429 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 TPD52L3Q96J77 140 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 EXO1Q9UQ84 846 aaKnown RBP17.22■□□□□ 0.35
CAPN1-201ENST00000279247 A0A1W2PQF6 199 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 ENO4A6NNW6 628 aa17.22■□□□□ 0.35
CAPN1-201ENST00000279247 OR1F1O43749 312 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms