RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 PPP1R8Q12972 351 aaKnown RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 XRCC4Q13426 336 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 BFSP2Q13515 415 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 TP53BP2Q13625 1128 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 USP41Q3LFD5 358 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 LDLRAP1Q5SW96 308 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 PIP5KL1Q5T9C9 394 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 LAYNQ6UX15 382 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 ZNF600Q6ZNG1 722 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 ZBTB49Q6ZSB9 765 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 PIGWQ7Z7B1 504 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 PHLDB2Q86SQ0 1253 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 LDB1Q86U70 411 aaPredicted RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 TSPAN33Q86UF1 283 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 GPAT4Q86UL3 456 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 TPRA1Q86W33 373 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 ARID3BQ8IVW6 561 aaPredicted RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 ZNF595Q8IYB9 648 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 METTL25Q8N6Q8 603 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 AMER3Q8N944 861 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 ZNF565Q8N9K5 539 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 STKLD1Q8NE28 680 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 C17orf47Q8NEP4 570 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 CAGE1Q8TC20 777 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 TMEM171Q8WVE6 324 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 UBLCP1Q8WVY7 318 aaPredicted RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 OR1E3Q8WZA6 343 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 LARP4BQ92615 738 aaKnown RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 RIT1Q92963 219 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 SLCO4A1Q96BD0 722 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 SGK3Q96BR1 496 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 MOAP1Q96BY2 351 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 NXNL1Q96CM4 212 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 RPRD1AQ96P16 312 aaPredicted RBP4.4□□□□□ -1.71
CD44-202ENST00000278385 PANX2Q96RD6 677 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 SMC6Q96SB8 1091 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 C19orf43Q9BQ61 176 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 FAM213AQ9BRX8 229 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 FICDQ9BVA6 458 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 HDHD5Q9BXW7 423 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 C11orf49Q9H6J7 331 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 RIOX1Q9H6W3 641 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 PSTPIP2Q9H939 334 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 FN3KRPQ9HA64 309 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 SDHAF3Q9NRP4 125 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 ASNSD1Q9NWL6 643 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 DNAJB4Q9UDY4 337 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 STEAP1Q9UHE8 339 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 LAMB1P07942 1786 aa4.4□□□□□ -1.71
CD44-202ENST00000278385 MYH13Q9UKX3 1938 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 MACROD2A1Z1Q3 448 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 PIPSLA2A3N6 862 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 MAGEA13PA6NCF6 341 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 BTBD17A6NE02 478 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 OR6C75A6NL08 312 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 C4orf47A7E2U8 309 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 BECN2A8MW95 431 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 PRR23D1E9PI22 279 aaPredicted RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 H0YGN5 161 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 TRIM77I1YAP6 450 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 MAGEB2O15479 319 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 OGG1O15527 345 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 AKR7A2O43488 359 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 DCXO43602 365 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 EXTL3O43909 919 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 CCNT1O60563 726 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 LPXNO60711 386 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 GPC4O75487 556 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 KRT36O76013 467 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 PRR23D2P0DMB1 279 aaPredicted RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 OR8G3PP0DMU2 310 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 TMEM225BP0DP42 221 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 HSPD1P10809 573 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 PRPS2P11908 318 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 F3P13726 295 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 LBPP18428 481 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 UGT1A6P19224 532 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 NCF2P19878 526 aaPredicted RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 ANXA7P20073 488 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 EEF1B2P24534 225 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 ADORA2AP29274 412 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 TKTP29401 623 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 SYKP43405 635 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 NOVP48745 357 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 ALDH7A1P49419 539 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 CCNHP51946 323 aaPredicted RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 RPL23AP62750 156 aaKnown RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 SIRPAP78324 504 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 TGM3Q08188 693 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 TNK1Q13470 666 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 DRP2Q13474 957 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 NCF4Q15080 339 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 PDK3Q15120 406 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 SHBQ15464 509 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 CSRP2Q16527 193 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 CCL14Q16627 93 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 HIST2H2ACQ16777 129 aaPredicted RBP4.39□□□□□ -1.71
CD44-202ENST00000278385 GXYLT1Q4G148 440 aa4.39□□□□□ -1.71
CD44-202ENST00000278385 Q5PR19 223 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms