RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 PLEKHG7Q6ZR37 379 aa8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 MARVELD2Q8N4S9 558 aa8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 ZNF675Q8TD23 568 aa8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 CASTOR1Q8WTX7 329 aa8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 MOAP1Q96BY2 351 aa8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 MYOCQ99972 504 aa8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 NIFKQ9BYG3 293 aaKnown RBP8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 SDHAF3Q9NRP4 125 aa8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 GNG8Q9UK08 70 aa8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 HSPE1-MOB4S4R3N1 261 aa8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 FRMPD1Q5SYB0 1578 aa8.46□□□□□ -1.05
SCUBE3-201ENST00000274938 E2F3O00716 465 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 FBP2O00757 339 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 CAPN5O15484 640 aaPredicted RBP8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 CREB1P16220 341 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 FBXO48Q5FWF7 155 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 ALKBH2Q6NS38 261 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 UGT2A3Q6UWM9 527 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 DPF3Q92784 378 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 CDCA5Q96FF9 252 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 SLC45A3Q96JT2 553 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 KLHL15Q96M94 604 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF696Q9H7X3 374 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 FANCFQ9NPI8 374 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 ERVK-19Q9WJR5 959 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 PCDHGC4Q9Y5F7 938 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 SSX4O60224 188 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 RPP14O95059 124 aaKnown RBP8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 APOC3P02656 99 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 CHRNA1P02708 482 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 IFNA4P05014 189 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 HCKP08631 526 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 ITGA5P08648 1049 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 SLC6A9P48067 706 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 TRAM2Q15035 370 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 C10orf62Q5T681 223 aaPredicted RBP8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 SLC16A9Q7RTY1 509 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 GPAT4Q86UL3 456 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 ZSWIM9Q86XI8 627 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 WFIKKN2Q8TEU8 576 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 FBXL20Q96IG2 436 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 TTYH2Q9BSA4 534 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 ZFP57Q9NU63 452 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 RNF19AQ9NV58 838 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 C1orf196B1AJZ1 125 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 EIF1AYO14602 144 aaKnown RBP8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 MT-CYBP00156 380 aaPredicted RBP8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 BCHEP06276 602 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 CHRNB2P17787 502 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 PROZP22891 400 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 EIF1AXP47813 144 aaKnown RBP8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 CAPZA1P52907 286 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 INHBEP58166 350 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 RAB39AQ14964 217 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 CMPK2Q5EBM0 449 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 PDSS1Q5T2R2 415 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 ARL14Q8N4G2 192 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 SLC25A36Q96CQ1 311 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 PKP4Q99569 1192 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 TMEM185BQ9H7F4 350 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 TIGARQ9NQ88 270 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 TAS2R9Q9NYW1 312 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 CNOT11Q9UKZ1 510 aaKnown RBP8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 A0A0G2JMP0 313 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 GMFGO60234 142 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 PTTG1O95997 202 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 KCNC4Q03721 635 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 RABL3Q5HYI8 236 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 RPL13AP3Q6NVV1 102 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 DUS1LQ6P1R4 473 aaKnown RBP8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 SLC2A7Q6PXP3 512 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 ZER1Q7Z7L7 766 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 ZNF584Q8IVC4 421 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 OR4M2Q8NGB6 313 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 GRHL3Q8TE85 626 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 HAPLN3Q96S86 360 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 SLA2Q9H6Q3 261 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 SALL4Q9UJQ4 1053 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 SPHKAPQ2M3C7 1700 aa8.46□□□□□ -1.06
SCUBE3-201ENST00000274938 EBLN1P0CF75 366 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CHRM1P11229 460 aaPredicted RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 UGT8Q16880 541 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 LRIF1Q5T3J3 769 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 GTF2IRD2BQ6EKJ0 949 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 PSRC1Q6PGN9 363 aaPredicted RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 SHQ1Q6PI26 577 aaKnown RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CXCL17Q6UXB2 119 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 GTF2IRD2Q86UP8 949 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 SLC15A3Q8IY34 581 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 TOR1AIP2Q8NFQ8 470 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 OR7D4Q8NG98 312 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 OR8J3Q8NGG0 315 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 NFKBIDQ8NI38 313 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 BBS10Q8TAM1 723 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 MTERF1Q99551 399 aaKnown RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 TRAV6A0A075B6T7 132 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 RHPN2P1A8MT19 583 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 CCL22O00626 93 aa8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 RNASEH2AO75792 299 aaKnown RBP8.45□□□□□ -1.06
SCUBE3-201ENST00000274938 RASAL1O95294 804 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms