RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 ASPNQ9BXN1 380 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 OTOFQ9HC10 1997 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 ABCB9Q9NP78 766 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 CLEC2DQ9UHP7 191 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 MBD1Q9UIS9 605 aaPredicted RBP12.47□□□□□ -0.41
COL8A1-202ENST00000273342 MKLN1Q9UL63 735 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 PCDHB5Q9Y5E4 795 aa12.47□□□□□ -0.41
COL8A1-202ENST00000273342 PLXNB2O15031 1838 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 TNFRSF10AO00220 468 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 MTX2O75431 263 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF865P0CJ78 1059 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-202ENST00000273342 ITGA1P56199 1179 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 RHOAP61586 193 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 KCNJ10P78508 379 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 GALK2Q01415 458 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 BOP1Q14137 746 aaKnown RBP12.46□□□□□ -0.41
COL8A1-202ENST00000273342 DUOXA1Q1HG43 343 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 LEXMQ3ZCV2 418 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF438Q7Z4V0 828 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 FCGR1BQ92637 280 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 C7orf34Q96L11 122 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 COL21A1Q96P44 957 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 C11orf16Q9NQ32 467 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 HCSTQ9UBK5 93 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 MALT1Q9UDY8 824 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 CFAP20Q9Y6A4 193 aaKnown RBP12.46□□□□□ -0.41
COL8A1-202ENST00000273342 PIKFYVEQ9Y2I7 2098 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 PCDH17O14917 1159 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 PRAMEF4O60810 478 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 AOC2O75106 756 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 SOX14O95416 240 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 IGFBP1P08833 259 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-202ENST00000273342 WEE1P30291 646 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 HOXC5Q00444 222 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 TSTA3Q13630 321 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-202ENST00000273342 TAF1CQ15572 869 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-202ENST00000273342 CHRNA6Q15825 494 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 PRAMEF9Q5VWM5 478 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 SPRYD7Q5W111 196 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 ZNF852Q6ZMS4 543 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 ABI3BPQ7Z7G0 1075 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 CCDC190Q86UF4 302 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 LSRQ86X29 649 aaPredicted RBP12.46□□□□□ -0.41
COL8A1-202ENST00000273342 CARNMT1Q8N4J0 409 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 CHAC2Q8WUX2 184 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 USP7Q93009 1102 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 FATE1Q969F0 183 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 TCF25Q9BQ70 676 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 BARHL1Q9BZE3 327 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 MAGEH1Q9H213 219 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 ANKHQ9HCJ1 492 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 IL26Q9NPH9 171 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 RIMKLBQ9ULI2 386 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 PCDHGB3Q9Y5G1 929 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 MYO16Q9Y6X6 1858 aa12.46□□□□□ -0.41
COL8A1-202ENST00000273342 SMLR1H3BR10 107 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 ACSL4O60488 711 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 ANXA5P08758 320 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 HLA-EP13747 358 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 ARF5P84085 180 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 ERAP2Q6P179 960 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 RFLNAQ6ZTI6 216 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 TSEN54Q7Z6J9 526 aaKnown RBP12.46□□□□□ -0.42
COL8A1-202ENST00000273342 SERPINA11Q86U17 422 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 BBS7Q8IWZ6 715 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 SLC34A3Q8N130 599 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.46□□□□□ -0.42
COL8A1-202ENST00000273342 OR4K1Q8NGD4 311 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 OR5AK3PQ8NH89 298 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 WBP2Q969T9 261 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 TRMT61AQ96FX7 289 aaKnown RBP12.46□□□□□ -0.42
COL8A1-202ENST00000273342 MCCC1Q96RQ3 725 aaPredicted RBP12.46□□□□□ -0.42
COL8A1-202ENST00000273342 PITX2Q99697 317 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 SMURF1Q9HCE7 757 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 MOSPD1Q9UJG1 213 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 ACSL6Q9UKU0 697 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 MAN2B2Q9Y2E5 1009 aa12.46□□□□□ -0.42
COL8A1-202ENST00000273342 GREB1Q4ZG55 1949 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 OR6C70A6NIJ9 312 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 RFXAPO00287 272 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 KDELR3O43731 214 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 SLITRK5O94991 958 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 SNX4O95219 450 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 APOL3O95236 402 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 KLKB1P03952 638 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 ETFAP13804 333 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 MAGEA11P43364 429 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 GPLD1P80108 840 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 CSTF3Q12996 717 aaKnown RBP12.45□□□□□ -0.42
COL8A1-202ENST00000273342 GPR50Q13585 617 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 HKDC1Q2TB90 917 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 COX20Q5RI15 118 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 SYCE2Q6PIF2 218 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 FAM131AQ6UXB0 335 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 TMPRSS11AQ6ZMR5 421 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 TSPAN33Q86UF1 283 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 STK40Q8N2I9 435 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 FOXJ1Q92949 421 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 NTMT1Q9BV86 223 aa12.45□□□□□ -0.42
COL8A1-202ENST00000273342 NDUFAF4Q9P032 175 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms