RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 GRIK5Q16478 980 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 LRRTM4Q86VH4 590 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 BEST4Q8NFU0 473 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 NECTIN4Q96NY8 510 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 SEMA6AQ9H2E6 1030 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 FBRSL1Q9HCM7 1045 aaKnown RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 PIH1D1Q9NWS0 290 aaKnown RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 UAP1L1Q3KQV9 507 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 LYSMD3Q7Z3D4 306 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 RNF148Q8N7C7 305 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 CYP2S1Q96SQ9 504 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 YTHDF1Q9BYJ9 559 aaKnown RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 GBA3Q9H227 469 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 SIX4Q9UIU6 781 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 A0A0J9YYE9 177 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 APBB3O95704 486 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 MAGEB1P43366 347 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 LSM3P62310 102 aaKnown RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ERVK-25P63136 954 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 TAF1AQ15573 450 aaPredicted RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 SLC15A3Q8IY34 581 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ERVK-6Q9BXR3 956 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ACTL8Q9H568 366 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 MYNNQ9NPC7 610 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ERVK-18Q9QC07 812 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 PRODH2Q9UF12 536 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 FKBP7Q9Y680 259 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 FAM230AA0A1W2PPH8 454 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF30P17039 623 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 TUBG1P23258 451 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 L1CAMP32004 1257 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ECH1Q13011 328 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 HNRNPDQ14103 355 aaKnown RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 IDNKQ5T6J7 187 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 CXorf57Q6NSI4 855 aaKnown RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 HYLS1Q96M11 299 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 TIMM29Q9BSF4 260 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 KATNBL1Q9H079 304 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 A8MVJ9 347 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 KRBOX1C9JBD0 128 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 E9PAM4 449 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ACTL6BO94805 426 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF84P51523 738 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 EXOC3L2Q2M3D2 409 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 TSSK3Q96PN8 268 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 UCK2Q9BZX2 261 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ABCB9Q9NP78 766 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF358Q9NW07 568 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 PTBP2Q9UKA9 531 aaKnown RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 GJE1A6NN92 205 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 LINC00032P0C843 101 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ZBED5Q49AG3 693 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 FAM198BQ6UWH4 519 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 COQ8AQ8NI60 647 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 PDE7BQ9NP56 450 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF705GA8MUZ8 300 aaPredicted RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 SLC34A2O95436 690 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 ALDH3B1P43353 468 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 CD47Q08722 323 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 MERTKQ12866 999 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 STK11Q15831 433 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 IFI44LQ53G44 452 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 SLC37A3Q8NCC5 494 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 RAB39BQ96DA2 213 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 MBOAT7Q96N66 472 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 PPP1R14DQ9NXH3 145 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 PDP1Q9P0J1 537 aaPredicted RBP12.91□□□□□ -0.34
PRDM16-201ENST00000270722 P2RX2Q9UBL9 471 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 GPR160Q9UJ42 338 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 UBIAD1Q9Y5Z9 338 aa12.91□□□□□ -0.34
PRDM16-201ENST00000270722 LMTK2Q8IWU2 1503 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 CPED1A4D0V7 1026 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 ETV3P41162 512 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 WRAP53Q9BUR4 548 aaKnown RBP12.9□□□□□ -0.34
PRDM16-201ENST00000270722 CADM1Q9BY67 442 aaKnown RBP12.9□□□□□ -0.34
PRDM16-201ENST00000270722 TBX1O43435 398 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 OR2B3O76000 313 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 GP1BBP13224 206 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 NUMBP49757 651 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 HFE2Q6ZVN8 426 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 MYO3AQ8NEV4 1616 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 SLC26A9Q7LBE3 791 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 ARL11Q969Q4 196 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 PAPOLGQ9BWT3 736 aaKnown RBP12.9□□□□□ -0.34
PRDM16-201ENST00000270722 HBQ1P09105 142 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 ANXA8P13928 327 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 TAS2R43P59537 309 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 GTF2H2Q13888 395 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF674Q2M3X9 581 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 GFOD2Q3B7J2 385 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 GTF2H2CQ6P1K8 395 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 FAM47BQ8NA70 645 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 ZNF597Q96LX8 424 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 IFT22Q9H7X7 185 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 BACE2Q9Y5Z0 518 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 ROBO3Q96MS0 1386 aa12.9□□□□□ -0.34
PRDM16-201ENST00000270722 NPC1O15118 1278 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms