RNA–Protein interactions for RNA: ENST00000264709.7

DNMT3A-201, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 9,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-201ENST00000264709 RAI2Q9Y5P3 530 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 TRAPPC13A5PLN9 417 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 SLC25A14O95258 325 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 MXD1Q05195 221 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 SETMARQ53H47 684 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 CRB2Q5IJ48 1285 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 ULK3Q6PHR2 472 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 SLC36A4Q6YBV0 504 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 PGAP1Q75T13 922 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 SLC16A10Q8TF71 515 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 SIPA1Q96FS4 1042 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 ABCG5Q9H222 651 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 SCN3AQ9NY46 2000 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 ISM1B1AKI9 464 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 PAHP00439 452 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 CD2P06729 351 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 HSD17B2P37059 387 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 EMX1Q04741 257 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 SCARB2Q14108 478 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 PLAG1Q6DJT9 500 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 C1orf74Q96LT6 269 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 FCRL4Q96PJ5 515 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 RBM38Q9H0Z9 239 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 AMBNQ9NP70 447 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 TTC24A2A3L6 582 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 MID1O15344 667 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 RPL6Q02878 288 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 HAGHLQ6PII5 290 aaPredicted RBP11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 NPAS3Q8IXF0 933 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 OR8K5Q8NH50 307 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 GTPBP3Q969Y2 492 aaKnown RBP11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 PCDHGA8Q9Y5G5 932 aa11.34□□□□□ -0.59
DNMT3A-201ENST00000264709 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 PRAMEF12O95522 483 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 RPA4Q13156 261 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 PLD4Q96BZ4 506 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 RADILQ96JH8 1075 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 UCK2Q9BZX2 261 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 MMP12P39900 470 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 ARCN1P48444 511 aaKnown RBP11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 SF3A2Q15428 464 aaKnown RBP11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 LRRN1Q6UXK5 716 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 STRCQ7RTU9 1775 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 PDZD9Q8IXQ8 264 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 POF1BQ8WVV4 589 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 LRCH3Q96II8 777 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 IL4I1Q96RQ9 567 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 C7orf72A4D263 438 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 RFPL3O75679 317 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 OR1G1P47890 313 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 EFR3AQ14156 821 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 SWI5Q1ZZU3 235 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 ATAD3CQ5T2N8 411 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 RBFOX1Q9NWB1 397 aaKnown RBP11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 TAL1P17542 331 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 HSPA7P48741 367 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 TSPAN5P62079 268 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 TAF1CQ15572 869 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 VMACQ2NL98 169 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 TIGD3Q6B0B8 471 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 B3GNT9Q6UX72 402 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 C17orf64Q86WR6 236 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 CLDN22Q8N7P3 220 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 ANKLE1Q8NAG6 615 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 TTLQ8NG68 377 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 PRDM5Q9NQX1 630 aaPredicted RBP11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 KDM4BO94953 1096 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 VNN2O95498 520 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 FCGRTP55899 365 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 ZBTB6Q15916 424 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 SOWAHAQ2M3V2 549 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 DUSP28Q4G0W2 176 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 ALFQ53S48 1182 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 MAMDC4Q6UXC1 1216 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 TMC8Q8IU68 726 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 GPR150Q8NGU9 434 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 IMP4Q96G21 291 aaKnown RBP11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 CDKN2AIPNLQ96HQ2 116 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 OR4K3Q96R72 315 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 FUZQ9BT04 418 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 B3GNT2Q9NY97 397 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 FZD4Q9ULV1 537 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 GTF2A1LQ9UNN4 478 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 HEATR5BQ9P2D3 2071 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 ANKRD34BA5PLL1 514 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 YJEFN3A6XGL0 299 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 SULT1B1O43704 296 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 CDRT1O95170 752 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 URODP06132 367 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 CD6P30203 668 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 AQP11Q8NBQ7 271 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 C14orf119Q9NWQ9 140 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 TAS2R8Q9NYW2 309 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 RGS13O14921 159 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 ZNF3P17036 446 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 LHCGRP22888 699 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 OXTRP30559 389 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 DCTP40126 519 aa11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 HNRNPA0Q13151 305 aaKnown RBP11.33□□□□□ -0.6
DNMT3A-201ENST00000264709 ZNHIT3Q15649 155 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms