RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 NECTIN3Q9NQS3 549 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 CTPS2Q9NRF8 586 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 SDR39U1Q9NRG7 319 aaPredicted RBP16.18■□□□□ 0.18
PHRF1-201ENST00000264555 RYKP34925 604 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 CLDN8P56748 225 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 DHCR24Q15392 516 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 TOR1AIP1Q5JTV8 583 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.18■□□□□ 0.18
PHRF1-201ENST00000264555 MDGA1Q8NFP4 955 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 OR4C6Q8NH72 309 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 SMURF2Q9HAU4 748 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 ANKHQ9HCJ1 492 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 IL26Q9NPH9 171 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 DZANK1Q9NVP4 752 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 MRPL39Q9NYK5 338 aaKnown RBP16.18■□□□□ 0.18
PHRF1-201ENST00000264555 ZNF140P52738 457 aaPredicted RBP16.18■□□□□ 0.18
PHRF1-201ENST00000264555 BTN3A2P78410 334 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 KIAA1614Q5VZ46 1190 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 TMEM25Q86YD3 366 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 SCAIQ8N9R8 606 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 OR4K1Q8NGD4 311 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 TMEM45AQ9NWC5 275 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 TLR4O00206 839 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 SNPHO15079 494 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 CAPN5O15484 640 aaPredicted RBP16.18■□□□□ 0.18
PHRF1-201ENST00000264555 ARHGEF15O94989 841 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 ITPRIPL2Q3MIP1 535 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 MINDY4Q4G0A6 757 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 CST9Q5W186 159 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 LCN8Q6JVE9 175 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 RNF130Q86XS8 419 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 OR56A1Q8NGH5 318 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 DIRAS2Q96HU8 199 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 SAMD11Q96NU1 681 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 CNPPD1Q9BV87 410 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 SPATA2Q9UM82 520 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 PCDHGA7Q9Y5G6 932 aa16.18■□□□□ 0.18
PHRF1-201ENST00000264555 DENRO43583 198 aaKnown RBP16.17■□□□□ 0.18
PHRF1-201ENST00000264555 TIA1P31483 386 aaKnown RBP eCLIP16.17■□□□□ 0.18
PHRF1-201ENST00000264555 SUOXP51687 545 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 VMACQ2NL98 169 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 PNPLA1Q8N8W4 532 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 HPRP00739 348 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 INHBCP55103 352 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 TLR1Q15399 786 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 RAB30Q15771 203 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 MEP1AQ16819 746 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 SMU1Q2TAY7 513 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 FAM26DQ5JW98 314 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 REEP3Q6NUK4 255 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 SLC39A11Q8N1S5 342 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 HMGB4Q8WW32 186 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 HOXB2P14652 356 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 DOC2AQ14183 400 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 TOMM20Q15388 145 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 SLC12A9Q9BXP2 914 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 CLEC4MQ9H2X3 399 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-201ENST00000264555 ABCB7O75027 752 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 SEPHS1P49903 392 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 MEF2AQ02078 507 aaPredicted RBP16.17■□□□□ 0.18
PHRF1-201ENST00000264555 GSTM4Q03013 218 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 TUBA3CQ13748 450 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 TAS1R1Q7RTX1 841 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 UCK2Q9BZX2 261 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 BTBD1Q9H0C5 482 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 GALNT8Q9NY28 637 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 PHF11Q9UIL8 331 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 PHIPQ8WWQ0 1821 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 A0A0J9YVX5 310 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 TNFP01375 233 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 ATP12AP54707 1039 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 GRM2Q14416 872 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 CXorf57Q6NSI4 855 aaKnown RBP16.17■□□□□ 0.18
PHRF1-201ENST00000264555 HTRA1Q92743 480 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 TRMT2BQ96GJ1 504 aaKnown RBP16.17■□□□□ 0.18
PHRF1-201ENST00000264555 ART5Q96L15 291 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 S100A13Q99584 98 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 POLR2J2Q9GZM3 115 aaKnown RBP16.17■□□□□ 0.18
PHRF1-201ENST00000264555 TMEM9Q9P0T7 183 aa16.17■□□□□ 0.18
PHRF1-201ENST00000264555 ABCA3Q99758 1704 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 RFPL2O75678 378 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 UQCRC2P22695 453 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 CLCN2P51788 898 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 PSMD4P55036 377 aaKnown RBP16.16■□□□□ 0.18
PHRF1-201ENST00000264555 OR4D2P58180 307 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 FBXO43Q4G163 708 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 OR4E2Q8NGC2 313 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 UFD1Q92890 307 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 TRIM39Q9HCM9 518 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 CLDND1Q9NY35 253 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 HMGN1P05114 100 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 SNX33Q8WV41 574 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 SORCS1Q8WY21 1168 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 ALPK1Q96QP1 1244 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 SPATA9Q9BWV2 254 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 KCNN2Q9H2S1 579 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 TAS2R9Q9NYW1 312 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 ITGB1BP2Q9UKP3 347 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 UBXN7O94888 489 aa16.16■□□□□ 0.18
PHRF1-201ENST00000264555 DSC1Q08554 894 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms